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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180789690
ODIT01000291
157838
Bacillota
GTC
Asp
>WENV180789719
ODIT01000417
151836
Bacillota
TCT
Arg
>WENV180789726
ODIT01000444
114002
Bacillota
CAA
Leu
>WENV180789729
ODIT01000484
16842
Bacillota
CGA
Ser
>WENV180789795
ODIT01000774
16842
Bacillota
CGA
Ser
>WENV180789820
ODIT01000872
237846
Bacillota
GCC
Gly
>WENV180789929
ODIT01001748
16834
Bacillota
GCT
Ser
>WENV180789952
ODIT01002006
37437
Bacillota
TAA
Leu
>WENV180789989
ODIT01002126
342895
Bacillota
CAT
Met
>WENV180790101
ODIT01003864
154711
Bacillota
TGG
Pro
>WENV180790157
ODIT01004542
237846
Bacillota
GCC
Gly
>WENV180790205
ODIT01005251
342895
Bacillota
CAT
Met
>WENV180790272
ODIT01007166
113951
Bacillota
GTA
Tyr
>WENV180790270
ODIT01007166
242848
Bacillota
GAA
Phe
>WENV180790296
ODIT01007876
243647
Bacillota
TTT
Lys
>WENV180790295
ODIT01007876
243646
Bacillota
GTT
Asn
>WENV180790298
ODIT01007876
243612
Bacillota
TAC
Val
>WENV180790294
ODIT01007876
368876
Bacillota
GCC
Gly
>WENV180790347
ODIT01009053
243647
Bacillota
TTT
Lys
>WENV180790345
ODIT01009053
243613
Bacillota
GTG
His
>WENV180790346
ODIT01009053
343027
Bacillota
TTG
Gln
>WENV180790421
ODIT01012125
18852
Bacillota
GCT
Ser
>WENV180790432
ODIT01012526
194064
Bacillota
GAT
Ile
>WENV180790433
ODIT01012567
342895
Bacillota
CAT
Met
>WENV180790441
ODIT01013019
152019
Bacillota
GAT
Ile
>WENV180790447
ODIT01013228
241471
Bacillota
TGC
Ala
>WENV180790456
ODIT01013813
194150
Bacillota
TGG
Pro
>WENV180790458
ODIT01013813
178024
Bacillota
TCT
Arg
>WENV180790493
ODIT01015622
296878
Bacillota
GTT
Asn
>WENV180790511
ODIT01016492
359540
Bacillota
GTT
Asn
>WENV180790517
ODIT01016492
380750
Bacillota
TGT
Thr
>WENV180790515
ODIT01016492
235288
Bacillota
TAC
Val
>WENV180790521
ODIT01016492
163753
Bacillota
TGG
Pro
>WENV180790516
ODIT01016492
199895
Bacillota
GTC
Asp
>WENV180790569
ODIT01019084
272488
Bacillota
GAA
Phe
>WENV180790615
ODIT01023165
199366
Bacillota
CAT
Met
>WENV180790614
ODIT01023165
81373
Bacillota
GTA
Tyr
>WENV180790618
ODIT01023635
185292
Bacillota
ACG
Arg
>WENV180790620
ODIT01023801
243119
Bacillota
CTT
Lys
>WENV180790636
ODIT01024941
243612
Bacillota
TAC
Val
>WENV180790653
ODIT01026002
243612
Bacillota
TAC
Val
>WENV180790651
ODIT01026002
287034
Bacillota
GTT
Asn
>WENV180790668
ODIT01027953
235137
Bacillota
TGC
Ala
>WENV180790674
ODIT01028744
241638
Bacillota
GTG
His
>WENV180790728
ODIT01033177
114002
Bacillota
CAA
Leu
>WENV180790784
ODIT01041787
113951
Bacillota
GTA
Tyr
>WENV180790786
ODIT01041787
256920
Bacillota
TTT
Lys
>WENV180790798
ODIT01042864
413657
Bacillota
CCC
Gly
>WENV180790811
ODIT01044183
114359
Bacillota
TAG
Leu
>WENV180790810
ODIT01044183
101142
Bacillota
GTA
Tyr
>WENV180790813
ODIT01044183
144762
Bacillota
TCT
Arg
>WENV180790826
ODIT01045281
162028
Bacillota
ACG
Arg
>WENV180790822
ODIT01045281
256920
Bacillota
TTT
Lys
>WENV180790837
ODIT01047005
155089
Bacillota
CAT
Met
>WENV180790857
ODIT01048623
340265
Bacillota
GCC
Gly
>WENV180790884
ODIT01053853
286137
Bacillota
GAA
Phe
>WENV180790899
ODIT01057693
341796
Bacillota
CCG
Arg
>WENV180790906
ODIT01058926
243099
Bacillota
GTT
Asn
>WENV180790910
ODIT01058926
241761
Bacillota
TAC
Val
>WENV180790909
ODIT01058926
241526
Bacillota
CTT
Lys
>WENV180790922
ODIT01061725
147135
Bacillota
ACG
Arg
>WENV180790940
ODIT01064325
144599
Bacillota
GTC
Asp
>WENV180790947
ODIT01065620
235292
Bacillota
CCA
Trp
>WENV180790953
ODIT01066050
178679
Bacillota
CAT
Met
>WENV180790959
ODIT01067912
37437
Bacillota
TAA
Leu
>WENV180790998
ODIT01077100
267649
Bacillota
TAC
Val
>WENV180791010
ODIT01078531
144672
Bacillota
TCT
Arg
>WENV180791012
ODIT01081618
273862
Bacillota
TGC
Ala
>WENV180791019
ODIT01083099
152045
Bacillota
CAT
Met
>WENV180791034
ODIT01087970
273029
Bacillota
TGT
Thr
>WENV180791037
ODIT01087970
281472
Bacillota
GGT
Thr
>WENV180791054
ODIT01091544
235197
Bacillota
GTC
Asp
>WENV180791056
ODIT01091544
368876
Bacillota
GCC
Gly
>WENV180791108
ODIT01110086
286137
Bacillota
GAA
Phe
>WENV180791117
ODIT01115507
243647
Bacillota
TTT
Lys
>WENV180791119
ODIT01115507
243612
Bacillota
TAC
Val
>WENV180791153
ODIT01128922
16834
Bacillota
GCT
Ser
>WENV180791163
ODIT01133389
342730
Bacillota
CTC
Glu
>WENV180791171
ODIT01134687
84171
Bacillota
GAG
Leu
>WENV180791170
ODIT01134687
81598
Bacillota
CAG
Leu
>WENV180791191
ODIT01144790
243647
Bacillota
TTT
Lys
>WENV180791193
ODIT01144790
243612
Bacillota
TAC
Val
>WENV180791222
ODIT01163315
155040
Bacillota
GAT
Ile
>WENV180791230
ODIT01169793
144766
Bacillota
CAT
Met
>WENV180791278
ODIT01212368
127572
Bacillota
ACG
Arg
>WENV180791279
ODIT01213395
152018
Bacillota
CCT
Arg
>WENV180791311
ODIT01240337
243612
Bacillota
TAC
Val
>WENV180791317
ODIT01242708
243646
Bacillota
GTT
Asn
>WENV180791319
ODIT01244031
16834
Bacillota
GCT
Ser
>WENV180791325
ODIT01250901
287034
Bacillota
GTT
Asn
>WENV180791326
ODIT01250940
296878
Bacillota
GTT
Asn
>WENV180791333
ODIT01256616
235197
Bacillota
GTC
Asp
>WENV180791335
ODIT01258227
368876
Bacillota
GCC
Gly
>WENV180791365
ODIT01269076
237846
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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