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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
148 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180791911
ODIW01000003
444984
Bacillota
GCC
Gly
>WENV180792303
ODIW01000242
235661
Bacillota
GTC
Asp
>WENV180792370
ODIW01000330
480337
Bacillota
TCC
Gly
>WENV180792372
ODIW01000330
20943
Bacillota
CGA
Ser
>WENV180792369
ODIW01000330
208539
Bacillota
TGG
Pro
>WENV180792371
ODIW01000330
184539
Bacillota
TCT
Arg
>WENV180792397
ODIW01000378
453914
Bacillota
GTT
Asn
>WENV180792399
ODIW01000378
280561
Bacillota
CAT
Met
>WENV180792414
ODIW01000436
283367
Bacillota
GCC
Gly
>WENV180792469
ODIW01000546
25955
Bacillota
GCT
Ser
>WENV180792510
ODIW01000686
221826
Bacillota
ACG
Arg
>WENV180792509
ODIW01000686
46835
Bacillota
TAA
Leu
>WENV180792562
ODIW01000776
20942
Bacillota
GGA
Ser
>WENV180792609
ODIW01001062
119459
Bacillota
TAG
Leu
>WENV180792611
ODIW01001071
141202
Bacillota
CAA
Leu
>WENV180792635
ODIW01001272
183994
Bacillota
TCT
Arg
>WENV180792633
ODIW01001272
208539
Bacillota
TGG
Pro
>WENV180792646
ODIW01001302
291553
Bacillota
GAA
Phe
>WENV180792645
ODIW01001302
280547
Bacillota
GTC
Asp
>WENV180792694
ODIW01001613
289154
Bacillota
CTT
Lys
>WENV180792696
ODIW01001616
283367
Bacillota
GCC
Gly
>WENV180792715
ODIW01001775
283367
Bacillota
GCC
Gly
>WENV180792722
ODIW01001819
405874
Bacillota
TTC
Glu
>WENV180792723
ODIW01001819
287643
Bacillota
TAC
Val
>WENV180792721
ODIW01001819
333281
Bacillota
GTT
Asn
>WENV180792726
ODIW01001843
283367
Bacillota
GCC
Gly
>WENV180792734
ODIW01001932
183995
Bacillota
GGG
Pro
>WENV180792741
ODIW01001991
48505
Bacillota
TGA
Ser
>WENV180792753
ODIW01002082
221826
Bacillota
ACG
Arg
>WENV180792787
ODIW01002310
322921
Bacillota
GTC
Asp
>WENV180792824
ODIW01002515
283367
Bacillota
GCC
Gly
>WENV180792828
ODIW01002577
291553
Bacillota
GAA
Phe
>WENV180792827
ODIW01002577
280547
Bacillota
GTC
Asp
>WENV180792831
ODIW01002631
293309
Bacillota
GTT
Asn
>WENV180792833
ODIW01002631
432453
Bacillota
TTC
Glu
>WENV180792830
ODIW01002631
445407
Bacillota
GCC
Gly
>WENV180792832
ODIW01002631
289761
Bacillota
TTT
Lys
>WENV180792834
ODIW01002631
289715
Bacillota
TAC
Val
>WENV180792859
ODIW01002936
452735
Bacillota
GCC
Gly
>WENV180792860
ODIW01002936
489283
Bacillota
GCA
Cys
>WENV180792862
ODIW01002954
20932
Bacillota
GCT
Ser
>WENV180792866
ODIW01003046
452735
Bacillota
GCC
Gly
>WENV180792877
ODIW01003117
183993
Bacillota
CAT
Met
>WENV180792876
ODIW01003117
289149
Bacillota
GGT
Thr
>WENV180792882
ODIW01003287
287380
Bacillota
CTT
Lys
>WENV180792906
ODIW01003749
289717
Bacillota
CTT
Lys
>WENV180792912
ODIW01003780
104114
Bacillota
CAG
Leu
>WENV180792927
ODIW01004229
100696
Bacillota
GTA
Tyr
>WENV180792928
ODIW01004229
187458
Bacillota
CAT
Met
>WENV180792956
ODIW01005011
289124
Bacillota
GTT
Asn
>WENV180792979
ODIW01005322
508151
Bacillota
GGT
Thr
>WENV180792983
ODIW01005353
283303
Bacillota
GTC
Asp
>WENV180792986
ODIW01005353
141141
Bacillota
GTA
Tyr
>WENV180793045
ODIW01006786
432453
Bacillota
TTC
Glu
>WENV180793042
ODIW01006786
445407
Bacillota
GCC
Gly
>WENV180793047
ODIW01006786
445407
Bacillota
GCC
Gly
>WENV180793044
ODIW01006786
289761
Bacillota
TTT
Lys
>WENV180793046
ODIW01006786
289715
Bacillota
TAC
Val
>WENV180793052
ODIW01006986
20932
Bacillota
GCT
Ser
>WENV180793067
ODIW01007350
404091
Bacillota
TTG
Gln
>WENV180793066
ODIW01007350
289716
Bacillota
GTG
His
>WENV180793082
ODIW01007555
338033
Bacillota
GAA
Phe
>WENV180793081
ODIW01007555
179935
Bacillota
GTC
Asp
>WENV180793109
ODIW01008413
100696
Bacillota
GTA
Tyr
>WENV180793111
ODIW01008413
100696
Bacillota
GTA
Tyr
>WENV180793112
ODIW01008413
187458
Bacillota
CAT
Met
>WENV180793108
ODIW01008413
356355
Bacillota
CAT
Met
>WENV180793110
ODIW01008413
356355
Bacillota
CAT
Met
>WENV180793127
ODIW01008649
452735
Bacillota
GCC
Gly
>WENV180793136
ODIW01008844
240104
Bacillota
TGG
Pro
>WENV180793161
ODIW01009509
119459
Bacillota
TAG
Leu
>WENV180793188
ODIW01010154
405874
Bacillota
TTC
Glu
>WENV180793186
ODIW01010154
403766
Bacillota
TTG
Gln
>WENV180793196
ODIW01010361
20942
Bacillota
GGA
Ser
>WENV180793214
ODIW01010694
402739
Bacillota
CCG
Arg
>WENV180793253
ODIW01012098
432453
Bacillota
TTC
Glu
>WENV180793254
ODIW01012098
289715
Bacillota
TAC
Val
>WENV180793268
ODIW01012610
482593
Bacillota
CCC
Gly
>WENV180793283
ODIW01013989
231532
Bacillota
ACG
Arg
>WENV180793284
ODIW01014068
289717
Bacillota
CTT
Lys
>WENV180793292
ODIW01014378
296855
Bacillota
GGT
Thr
>WENV180793293
ODIW01014378
184495
Bacillota
CAT
Met
>WENV180793289
ODIW01014378
289713
Bacillota
TGT
Thr
>WENV180793341
ODIW01015894
283367
Bacillota
GCC
Gly
>WENV180793352
ODIW01016495
187364
Bacillota
CAT
Met
>WENV180793353
ODIW01016576
482078
Bacillota
CCC
Gly
>WENV180793368
ODIW01017962
283367
Bacillota
GCC
Gly
>WENV180793377
ODIW01018779
156730
Bacillota
ACG
Arg
>WENV180793395
ODIW01019477
291553
Bacillota
GAA
Phe
>WENV180793394
ODIW01019477
280547
Bacillota
GTC
Asp
>WENV180793408
ODIW01019883
20943
Bacillota
CGA
Ser
>WENV180793433
ODIW01021874
293309
Bacillota
GTT
Asn
>WENV180793434
ODIW01021874
432453
Bacillota
TTC
Glu
>WENV180793435
ODIW01021874
289715
Bacillota
TAC
Val
>WENV180793452
ODIW01023738
339995
Bacillota
TGC
Ala
>WENV180793458
ODIW01024595
48505
Bacillota
TGA
Ser
>WENV180793513
ODIW01029634
295166
Bacillota
TGC
Ala
>WENV180793521
ODIW01030047
289154
Bacillota
CTT
Lys
>WENV180793526
ODIW01030274
403759
Bacillota
CTC
Glu
>WENV180793547
ODIW01031528
47166
Bacillota
CGA
Ser
>WENV180793576
ODIW01034265
287643
Bacillota
TAC
Val
>WENV180793575
ODIW01034265
287380
Bacillota
CTT
Lys
>WENV180793577
ODIW01034265
179935
Bacillota
GTC
Asp
>WENV180793572
ODIW01034265
289124
Bacillota
GTT
Asn
>WENV180793583
ODIW01036433
25955
Bacillota
GCT
Ser
>WENV180793585
ODIW01036484
283622
Bacillota
CTT
Lys
>WENV180793600
ODIW01039985
339995
Bacillota
TGC
Ala
>WENV180793608
ODIW01042852
289717
Bacillota
CTT
Lys
>WENV180793614
ODIW01043915
288834
Bacillota
TAC
Val
>WENV180793617
ODIW01043915
301649
Bacillota
TTT
Lys
>WENV180793615
ODIW01043915
141141
Bacillota
GTA
Tyr
>WENV180793622
ODIW01044500
184537
Bacillota
ACG
Arg
>WENV180793647
ODIW01047049
280486
Bacillota
TGC
Ala
>WENV180793651
ODIW01047848
280500
Bacillota
TGC
Ala
>WENV180793660
ODIW01048853
405874
Bacillota
TTC
Glu
>WENV180793656
ODIW01048853
452735
Bacillota
GCC
Gly
>WENV180793657
ODIW01048853
289147
Bacillota
GTT
Asn
>WENV180793662
ODIW01049152
459011
Bacillota
TGT
Thr
>WENV180793661
ODIW01049152
195133
Bacillota
GTC
Asp
>WENV180793700
ODIW01052877
212982
Bacillota
ACG
Arg
>WENV180793698
ODIW01052877
455891
Bacillota
GCC
Gly
>WENV180793710
ODIW01053747
338033
Bacillota
GAA
Phe
>WENV180793714
ODIW01053747
110240
Bacillota
GAG
Leu
>WENV180793735
ODIW01059088
339995
Bacillota
TGC
Ala
>WENV180793736
ODIW01059775
280486
Bacillota
TGC
Ala
>WENV180793745
ODIW01062185
118370
Bacillota
TAG
Leu
>WENV180793757
ODIW01063623
289761
Bacillota
TTT
Lys
>WENV180793762
ODIW01066253
289121
Bacillota
CCA
Trp
>WENV180793761
ODIW01066253
287508
Bacillota
GTG
His
>WENV180793771
ODIW01072944
280486
Bacillota
TGC
Ala
>WENV180793786
ODIW01082256
20932
Bacillota
GCT
Ser
>WENV180793796
ODIW01086288
280486
Bacillota
TGC
Ala
>WENV180793799
ODIW01088637
339995
Bacillota
TGC
Ala
>WENV180793815
ODIW01097376
100945
Bacillota
CAG
Leu
>WENV180793821
ODIW01101526
323864
Bacillota
TGC
Ala
>WENV180793824
ODIW01103276
183957
Bacillota
CCT
Arg
>WENV180793829
ODIW01105045
432453
Bacillota
TTC
Glu
>WENV180793830
ODIW01105045
289715
Bacillota
TAC
Val
>WENV180793837
ODIW01108523
291553
Bacillota
GAA
Phe
>WENV180793836
ODIW01108523
280547
Bacillota
GTC
Asp
>WENV180793848
ODIW01115666
408526
Bacillota
GCA
Cys
>WENV180793847
ODIW01115666
445407
Bacillota
GCC
Gly
>WENV180793863
ODIW01132038
280547
Bacillota
GTC
Asp
>WENV180793867
ODIW01133459
291553
Bacillota
GAA
Phe
>WENV180793882
ODIW01136596
432453
Bacillota
TTC
Glu
>WENV180793883
ODIW01136596
289715
Bacillota
TAC
Val
>WENV180793894
ODIW01143667
289717
Bacillota
CTT
Lys
>WENV180793900
ODIW01151590
445407
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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