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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180803167
ODJE01048919
212982
Bacillota
ACG
Arg
>WENV180803193
ODJE01056480
184537
Bacillota
ACG
Arg
>WENV180803474
ODJE01169848
221826
Bacillota
ACG
Arg
>WENV180802198
ODJE01000477
221826
Bacillota
ACG
Arg
>WENV180802132
ODJE01000304
231532
Bacillota
ACG
Arg
>WENV180802843
ODJE01010918
156730
Bacillota
ACG
Arg
>WENV180802946
ODJE01017881
141202
Bacillota
CAA
Leu
>WENV180803336
ODJE01093646
141202
Bacillota
CAA
Leu
>WENV180802513
ODJE01002803
104114
Bacillota
CAG
Leu
>WENV180802989
ODJE01019477
100945
Bacillota
CAG
Leu
>WENV180803056
ODJE01029402
187458
Bacillota
CAT
Met
>WENV180802958
ODJE01018508
183993
Bacillota
CAT
Met
>WENV180802904
ODJE01014405
184495
Bacillota
CAT
Met
>WENV180803017
ODJE01022777
187364
Bacillota
CAT
Met
>WENV180802593
ODJE01003955
289121
Bacillota
CCA
Trp
>WENV180802131
ODJE01000304
291629
Bacillota
CCA
Trp
>WENV180803005
ODJE01021081
482593
Bacillota
CCC
Gly
>WENV180803067
ODJE01030792
482078
Bacillota
CCC
Gly
>WENV180802844
ODJE01010966
402739
Bacillota
CCG
Arg
>WENV180803004
ODJE01020993
183957
Bacillota
CCT
Arg
>WENV180802168
ODJE01000390
47166
Bacillota
CGA
Ser
>WENV180802309
ODJE01000998
20943
Bacillota
CGA
Ser
>WENV180802317
ODJE01001070
20943
Bacillota
CGA
Ser
>WENV180802133
ODJE01000304
179845
Bacillota
CGG
Pro
>WENV180803384
ODJE01118529
403759
Bacillota
CTC
Glu
>WENV180803002
ODJE01020938
284746
Bacillota
CTG
Gln
>WENV180802504
ODJE01002654
289717
Bacillota
CTT
Lys
>WENV180802929
ODJE01016541
289717
Bacillota
CTT
Lys
>WENV180803032
ODJE01024749
289717
Bacillota
CTT
Lys
>WENV180802684
ODJE01006051
283622
Bacillota
CTT
Lys
>WENV180802558
ODJE01003424
287380
Bacillota
CTT
Lys
>WENV180802981
ODJE01019477
287380
Bacillota
CTT
Lys
>WENV180802261
ODJE01000742
289154
Bacillota
CTT
Lys
>WENV180802984
ODJE01019477
338033
Bacillota
GAA
Phe
>WENV180803536
ODJE01225624
338033
Bacillota
GAA
Phe
>WENV180803309
ODJE01084414
408526
Bacillota
GCA
Cys
>WENV180802180
ODJE01000420
489283
Bacillota
GCA
Cys
>WENV180802179
ODJE01000420
404126
Bacillota
GCC
Gly
>WENV180802677
ODJE01006037
404126
Bacillota
GCC
Gly
>WENV180802010
ODJE01000072
283367
Bacillota
GCC
Gly
>WENV180802347
ODJE01001336
283367
Bacillota
GCC
Gly
>WENV180802941
ODJE01017343
283367
Bacillota
GCC
Gly
>WENV180803122
ODJE01039886
283367
Bacillota
GCC
Gly
>WENV180803073
ODJE01031297
444984
Bacillota
GCC
Gly
>WENV180802673
ODJE01005790
20932
Bacillota
GCT
Ser
>WENV180802791
ODJE01009605
20932
Bacillota
GCT
Ser
>WENV180802366
ODJE01001414
20942
Bacillota
GGA
Ser
>WENV180802906
ODJE01014643
20942
Bacillota
GGA
Ser
>WENV180802382
ODJE01001555
183995
Bacillota
GGG
Pro
>WENV180802903
ODJE01014405
296855
Bacillota
GGT
Thr
>WENV180802957
ODJE01018508
289149
Bacillota
GGT
Thr
>WENV180803055
ODJE01029402
100696
Bacillota
GTA
Tyr
>WENV180802696
ODJE01006235
141141
Bacillota
GTA
Tyr
>WENV180802887
ODJE01013830
141141
Bacillota
GTA
Tyr
>WENV180803463
ODJE01163208
283303
Bacillota
GTC
Asp
>WENV180802983
ODJE01019477
179935
Bacillota
GTC
Asp
>WENV180803535
ODJE01225624
179935
Bacillota
GTC
Asp
>WENV180803306
ODJE01084414
280547
Bacillota
GTC
Asp
>WENV180803552
ODJE01231838
280547
Bacillota
GTC
Asp
>WENV180802592
ODJE01003955
287508
Bacillota
GTG
His
>WENV180802617
ODJE01004509
289716
Bacillota
GTG
His
>WENV180803097
ODJE01036510
289716
Bacillota
GTG
His
>WENV180802678
ODJE01006037
289147
Bacillota
GTT
Asn
>WENV180803551
ODJE01230502
293309
Bacillota
GTT
Asn
>WENV180802135
ODJE01000304
333281
Bacillota
GTT
Asn
>WENV180802978
ODJE01019477
289124
Bacillota
GTT
Asn
>WENV180803007
ODJE01021815
289124
Bacillota
GTT
Asn
>WENV180802319
ODJE01001081
178610
Bacillota
GTT
Asn
>WENV180803494
ODJE01190229
178610
Bacillota
GTT
Asn
>WENV180802197
ODJE01000477
46835
Bacillota
TAA
Leu
>WENV180803500
ODJE01193999
288834
Bacillota
TAC
Val
>WENV180802137
ODJE01000304
287643
Bacillota
TAC
Val
>WENV180802682
ODJE01006037
287643
Bacillota
TAC
Val
>WENV180802982
ODJE01019477
287643
Bacillota
TAC
Val
>WENV180803543
ODJE01226753
289715
Bacillota
TAC
Val
>WENV180802815
ODJE01010174
321248
Bacillota
TAC
Val
>WENV180803365
ODJE01107104
321248
Bacillota
TAC
Val
>WENV180803533
ODJE01225383
321248
Bacillota
TAC
Val
>WENV180802800
ODJE01009842
317820
Bacillota
TAC
Val
>WENV180802342
ODJE01001259
119459
Bacillota
TAG
Leu
>WENV180802346
ODJE01001322
119459
Bacillota
TAG
Leu
>WENV180803339
ODJE01094600
480337
Bacillota
TCC
Gly
>WENV180802391
ODJE01001648
183994
Bacillota
TCT
Arg
>WENV180803340
ODJE01094600
184539
Bacillota
TCT
Arg
>WENV180802772
ODJE01008815
48505
Bacillota
TGA
Ser
>WENV180802779
ODJE01009038
48505
Bacillota
TGA
Ser
>WENV180803453
ODJE01156283
48505
Bacillota
TGA
Ser
>WENV180803556
ODJE01235266
48505
Bacillota
TGA
Ser
>WENV180803195
ODJE01056747
280500
Bacillota
TGC
Ala
>WENV180803313
ODJE01085778
295166
Bacillota
TGC
Ala
>WENV180803066
ODJE01030750
339995
Bacillota
TGC
Ala
>WENV180803335
ODJE01093645
339995
Bacillota
TGC
Ala
>WENV180803529
ODJE01223598
339995
Bacillota
TGC
Ala
>WENV180802116
ODJE01000276
323864
Bacillota
TGC
Ala
>WENV180803369
ODJE01107853
323864
Bacillota
TGC
Ala
>WENV180803016
ODJE01022753
280486
Bacillota
TGC
Ala
>WENV180803060
ODJE01030252
280486
Bacillota
TGC
Ala
>WENV180803207
ODJE01059852
280486
Bacillota
TGC
Ala
>WENV180802389
ODJE01001648
208539
Bacillota
TGG
Pro
>WENV180803338
ODJE01094600
208539
Bacillota
TGG
Pro
>WENV180802900
ODJE01014405
289713
Bacillota
TGT
Thr
>WENV180802136
ODJE01000304
405874
Bacillota
TTC
Glu
>WENV180802681
ODJE01006037
405874
Bacillota
TTC
Glu
>WENV180803143
ODJE01043907
409321
Bacillota
TTC
Glu
>WENV180803542
ODJE01226753
432453
Bacillota
TTC
Glu
>WENV180803317
ODJE01086816
398857
Bacillota
TTC
Glu
>WENV180802618
ODJE01004509
404091
Bacillota
TTG
Gln
>WENV180803098
ODJE01036510
404091
Bacillota
TTG
Gln
>WENV180802060
ODJE01000157
403766
Bacillota
TTG
Gln
>WENV180802889
ODJE01013830
301649
Bacillota
TTT
Lys
>WENV180803163
ODJE01048919
301649
Bacillota
TTT
Lys
>WENV180802619
ODJE01004509
289761
Bacillota
TTT
Lys
>WENV180802974
ODJE01019380
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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