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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
149 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180882415
ODMC01000038
154711
Bacillota
TGG
Pro
>WENV180882466
ODMC01000058
157838
Bacillota
GTC
Asp
>WENV180882609
ODMC01000209
37213
Bacillota
TGA
Ser
>WENV180882619
ODMC01000228
235197
Bacillota
GTC
Asp
>WENV180882621
ODMC01000228
368876
Bacillota
GCC
Gly
>WENV180882634
ODMC01000245
237846
Bacillota
GCC
Gly
>WENV180882636
ODMC01000245
237846
Bacillota
GCC
Gly
>WENV180882663
ODMC01000298
157838
Bacillota
GTC
Asp
>WENV180882734
ODMC01000432
18852
Bacillota
GCT
Ser
>WENV180882758
ODMC01000468
155089
Bacillota
CAT
Met
>WENV180882765
ODMC01000490
37437
Bacillota
TAA
Leu
>WENV180882795
ODMC01000536
194150
Bacillota
TGG
Pro
>WENV180882797
ODMC01000536
152046
Bacillota
TCT
Arg
>WENV180882819
ODMC01000604
185292
Bacillota
ACG
Arg
>WENV180882858
ODMC01000719
151836
Bacillota
TCT
Arg
>WENV180882874
ODMC01000780
384950
Bacillota
GCC
Gly
>WENV180882875
ODMC01000780
419945
Bacillota
GCA
Cys
>WENV180882891
ODMC01000851
144672
Bacillota
TCT
Arg
>WENV180882957
ODMC01001069
342895
Bacillota
CAT
Met
>WENV180882995
ODMC01001251
152047
Bacillota
GGG
Pro
>WENV180883016
ODMC01001330
307003
Bacillota
TGC
Ala
>WENV180883031
ODMC01001387
267649
Bacillota
TAC
Val
>WENV180883053
ODMC01001461
342736
Bacillota
TTG
Gln
>WENV180883055
ODMC01001465
16842
Bacillota
CGA
Ser
>WENV180883056
ODMC01001472
368876
Bacillota
GCC
Gly
>WENV180883057
ODMC01001472
243646
Bacillota
GTT
Asn
>WENV180883119
ODMC01001858
384950
Bacillota
GCC
Gly
>WENV180883120
ODMC01001858
296878
Bacillota
GTT
Asn
>WENV180883123
ODMC01001858
393635
Bacillota
TTC
Glu
>WENV180883124
ODMC01001858
241761
Bacillota
TAC
Val
>WENV180883133
ODMC01001936
81373
Bacillota
GTA
Tyr
>WENV180883134
ODMC01001936
199366
Bacillota
CAT
Met
>WENV180883144
ODMC01002027
237846
Bacillota
GCC
Gly
>WENV180883177
ODMC01002247
246392
Bacillota
GTT
Asn
>WENV180883178
ODMC01002247
393635
Bacillota
TTC
Glu
>WENV180883196
ODMC01002446
243119
Bacillota
CTT
Lys
>WENV180883225
ODMC01002640
272488
Bacillota
GAA
Phe
>WENV180883232
ODMC01002648
113951
Bacillota
GTA
Tyr
>WENV180883246
ODMC01002893
16842
Bacillota
CGA
Ser
>WENV180883262
ODMC01003165
384950
Bacillota
GCC
Gly
>WENV180883289
ODMC01003488
347851
Bacillota
TTC
Glu
>WENV180883290
ODMC01003488
148348
Bacillota
GTC
Asp
>WENV180883291
ODMC01003488
286137
Bacillota
GAA
Phe
>WENV180883326
ODMC01003758
298620
Bacillota
CAT
Met
>WENV180883348
ODMC01004036
16834
Bacillota
GCT
Ser
>WENV180883409
ODMC01004829
235197
Bacillota
GTC
Asp
>WENV180883415
ODMC01004947
96694
Bacillota
TAG
Leu
>WENV180883417
ODMC01004957
81373
Bacillota
GTA
Tyr
>WENV180883419
ODMC01004957
81373
Bacillota
GTA
Tyr
>WENV180883420
ODMC01004957
199366
Bacillota
CAT
Met
>WENV180883433
ODMC01005156
114002
Bacillota
CAA
Leu
>WENV180883442
ODMC01005324
241638
Bacillota
GTG
His
>WENV180883447
ODMC01005429
37213
Bacillota
TGA
Ser
>WENV180883476
ODMC01005987
155089
Bacillota
CAT
Met
>WENV180883477
ODMC01006074
235197
Bacillota
GTC
Asp
>WENV180883486
ODMC01006252
391536
Bacillota
TTC
Glu
>WENV180883487
ODMC01006252
243612
Bacillota
TAC
Val
>WENV180883497
ODMC01006365
241526
Bacillota
CTT
Lys
>WENV180883516
ODMC01006841
194064
Bacillota
GAT
Ile
>WENV180883549
ODMC01007929
384950
Bacillota
GCC
Gly
>WENV180883552
ODMC01008082
342895
Bacillota
CAT
Met
>WENV180883561
ODMC01008444
37551
Bacillota
CGA
Ser
>WENV180883564
ODMC01008475
235197
Bacillota
GTC
Asp
>WENV180883566
ODMC01008475
368876
Bacillota
GCC
Gly
>WENV180883624
ODMC01009991
436750
Bacillota
TCC
Gly
>WENV180883625
ODMC01009991
235288
Bacillota
TAC
Val
>WENV180883645
ODMC01010787
273029
Bacillota
TGT
Thr
>WENV180883648
ODMC01010787
281472
Bacillota
GGT
Thr
>WENV180883649
ODMC01010787
152491
Bacillota
CAT
Met
>WENV180883659
ODMC01011055
272488
Bacillota
GAA
Phe
>WENV180883666
ODMC01011261
16834
Bacillota
GCT
Ser
>WENV180883684
ODMC01012529
243099
Bacillota
GTT
Asn
>WENV180883687
ODMC01012529
241526
Bacillota
CTT
Lys
>WENV180883688
ODMC01012529
241761
Bacillota
TAC
Val
>WENV180883689
ODMC01012529
148348
Bacillota
GTC
Asp
>WENV180883690
ODMC01012529
286137
Bacillota
GAA
Phe
>WENV180883694
ODMC01012529
84171
Bacillota
GAG
Leu
>WENV180883695
ODMC01012529
81598
Bacillota
CAG
Leu
>WENV180883696
ODMC01012529
84171
Bacillota
GAG
Leu
>WENV180883757
ODMC01014085
315448
Bacillota
GGT
Thr
>WENV180883800
ODMC01016750
241471
Bacillota
TGC
Ala
>WENV180883820
ODMC01017308
391536
Bacillota
TTC
Glu
>WENV180883821
ODMC01017308
243612
Bacillota
TAC
Val
>WENV180883866
ODMC01019232
391536
Bacillota
TTC
Glu
>WENV180883867
ODMC01019232
243612
Bacillota
TAC
Val
>WENV180883906
ODMC01022584
413657
Bacillota
CCC
Gly
>WENV180883926
ODMC01024311
391536
Bacillota
TTC
Glu
>WENV180883927
ODMC01024311
243612
Bacillota
TAC
Val
>WENV180883930
ODMC01024648
307003
Bacillota
TGC
Ala
>WENV180883931
ODMC01024648
152019
Bacillota
GAT
Ile
>WENV180883935
ODMC01024988
243099
Bacillota
GTT
Asn
>WENV180883947
ODMC01025667
243613
Bacillota
GTG
His
>WENV180883948
ODMC01025667
343027
Bacillota
TTG
Gln
>WENV180883949
ODMC01025667
243647
Bacillota
TTT
Lys
>WENV180883955
ODMC01026239
185292
Bacillota
ACG
Arg
>WENV180883964
ODMC01026889
235137
Bacillota
TGC
Ala
>WENV180883968
ODMC01027512
237846
Bacillota
GCC
Gly
>WENV180883980
ODMC01028790
341796
Bacillota
CCG
Arg
>WENV180884013
ODMC01031582
152018
Bacillota
CCT
Arg
>WENV180884015
ODMC01031865
342895
Bacillota
CAT
Met
>WENV180884039
ODMC01033345
342730
Bacillota
CTC
Glu
>WENV180884042
ODMC01033716
413179
Bacillota
CCC
Gly
>WENV180884055
ODMC01034852
235137
Bacillota
TGC
Ala
>WENV180884084
ODMC01039119
287034
Bacillota
GTT
Asn
>WENV180884087
ODMC01039626
152051
Bacillota
ACG
Arg
>WENV180884146
ODMC01046889
281472
Bacillota
GGT
Thr
>WENV180884147
ODMC01046889
152045
Bacillota
CAT
Met
>WENV180884162
ODMC01050540
144762
Bacillota
TCT
Arg
>WENV180884169
ODMC01051562
144766
Bacillota
CAT
Met
>WENV180884188
ODMC01055198
147135
Bacillota
ACG
Arg
>WENV180884207
ODMC01060404
392638
Bacillota
TGT
Thr
>WENV180884211
ODMC01060404
163753
Bacillota
TGG
Pro
>WENV180884214
ODMC01060673
307003
Bacillota
TGC
Ala
>WENV180884220
ODMC01061384
178679
Bacillota
CAT
Met
>WENV180884225
ODMC01062437
148268
Bacillota
CGG
Pro
>WENV180884229
ODMC01064250
389888
Bacillota
GCC
Gly
>WENV180884231
ODMC01064250
162028
Bacillota
ACG
Arg
>WENV180884238
ODMC01065782
235150
Bacillota
TGC
Ala
>WENV180884243
ODMC01066037
250201
Bacillota
TGC
Ala
>WENV180884246
ODMC01066847
235197
Bacillota
GTC
Asp
>WENV180884259
ODMC01071677
390153
Bacillota
GCC
Gly
>WENV180884282
ODMC01075198
235137
Bacillota
TGC
Ala
>WENV180884284
ODMC01075242
338152
Bacillota
TTC
Glu
>WENV180884321
ODMC01083473
391536
Bacillota
TTC
Glu
>WENV180884322
ODMC01083473
243612
Bacillota
TAC
Val
>WENV180884324
ODMC01085929
194150
Bacillota
TGG
Pro
>WENV180884326
ODMC01085929
178024
Bacillota
TCT
Arg
>WENV180884328
ODMC01086415
235150
Bacillota
TGC
Ala
>WENV180884342
ODMC01092356
114359
Bacillota
TAG
Leu
>WENV180884362
ODMC01102315
235137
Bacillota
TGC
Ala
>WENV180884386
ODMC01115068
235150
Bacillota
TGC
Ala
>WENV180884390
ODMC01116984
391536
Bacillota
TTC
Glu
>WENV180884391
ODMC01116984
243612
Bacillota
TAC
Val
>WENV180884394
ODMC01117510
155040
Bacillota
GAT
Ile
>WENV180884418
ODMC01135218
199895
Bacillota
GTC
Asp
>WENV180884432
ODMC01142217
368876
Bacillota
GCC
Gly
>WENV180884433
ODMC01142217
243646
Bacillota
GTT
Asn
>WENV180884436
ODMC01142964
272488
Bacillota
GAA
Phe
>WENV180884450
ODMC01153306
391536
Bacillota
TTC
Glu
>WENV180884451
ODMC01153306
243612
Bacillota
TAC
Val
>WENV180884452
ODMC01153393
144599
Bacillota
GTC
Asp
>WENV180884469
ODMC01161055
235150
Bacillota
TGC
Ala
>WENV180884483
ODMC01164919
368876
Bacillota
GCC
Gly
>WENV180884492
ODMC01169466
235197
Bacillota
GTC
Asp
>WENV180884500
ODMC01175965
388132
Bacillota
TTC
Glu
>WENV180884508
ODMC01178180
154711
Bacillota
TGG
Pro
>WENV180884510
ODMC01178394
243647
Bacillota
TTT
Lys
>WENV180884511
ODMC01178425
235150
Bacillota
TGC
Ala
>WENV180884523
ODMC01179913
308424
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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