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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180889901
ODMN01234190
283303
Bacillota
GTC
Asp
>WENV180889910
ODMN01247664
280500
Bacillota
TGC
Ala
>WENV180888604
ODMN01001879
184537
Bacillota
ACG
Arg
>WENV180889361
ODMN01033850
221826
Bacillota
ACG
Arg
>WENV180888203
ODMN01000225
408526
Bacillota
GCA
Cys
>WENV180888775
ODMN01003465
296855
Bacillota
GGT
Thr
>WENV180888140
ODMN01000084
287508
Bacillota
GTG
His
>WENV180888610
ODMN01001925
48505
Bacillota
TGA
Ser
>WENV180888328
ODMN01000460
289717
Bacillota
CTT
Lys
>WENV180888808
ODMN01003915
20932
Bacillota
GCT
Ser
>WENV180888201
ODMN01000225
291553
Bacillota
GAA
Phe
>WENV180888973
ODMN01008010
291553
Bacillota
GAA
Phe
>WENV180889510
ODMN01053003
295166
Bacillota
TGC
Ala
>WENV180889702
ODMN01108983
295166
Bacillota
TGC
Ala
>WENV180889711
ODMN01110891
295166
Bacillota
TGC
Ala
>WENV180889791
ODMN01145809
295166
Bacillota
TGC
Ala
>WENV180888541
ODMN01001549
482593
Bacillota
CCC
Gly
>WENV180889588
ODMN01067210
339995
Bacillota
TGC
Ala
>WENV180888696
ODMN01002608
20942
Bacillota
GGA
Ser
>WENV180888447
ODMN01001008
409321
Bacillota
TTC
Glu
>WENV180889259
ODMN01022698
409321
Bacillota
TTC
Glu
>WENV180889579
ODMN01064700
409321
Bacillota
TTC
Glu
>WENV180889178
ODMN01016599
359682
Bacillota
TAC
Val
>WENV180889332
ODMN01030558
100696
Bacillota
GTA
Tyr
>WENV180889924
ODMN01252082
100696
Bacillota
GTA
Tyr
>WENV180887988
ODMN01000008
100696
Bacillota
GTA
Tyr
>WENV180889886
ODMN01212604
287643
Bacillota
TAC
Val
>WENV180888450
ODMN01001008
452735
Bacillota
GCC
Gly
>WENV180888618
ODMN01002042
452735
Bacillota
GCC
Gly
>WENV180888619
ODMN01002042
452735
Bacillota
GCC
Gly
>WENV180888620
ODMN01002042
452735
Bacillota
GCC
Gly
>WENV180889779
ODMN01139179
452735
Bacillota
GCC
Gly
>WENV180887989
ODMN01000008
187458
Bacillota
CAT
Met
>WENV180888514
ODMN01001401
187458
Bacillota
CAT
Met
>WENV180889736
ODMN01119221
187458
Bacillota
CAT
Met
>WENV180888449
ODMN01001008
338033
Bacillota
GAA
Phe
>WENV180889961
ODMN01261763
338033
Bacillota
GAA
Phe
>WENV180888512
ODMN01001401
356355
Bacillota
CAT
Met
>WENV180889923
ODMN01252082
356355
Bacillota
CAT
Met
>WENV180888776
ODMN01003465
184495
Bacillota
CAT
Met
>WENV180888385
ODMN01000732
141202
Bacillota
CAA
Leu
>WENV180888142
ODMN01000084
402739
Bacillota
CCG
Arg
>WENV180889063
ODMN01011281
402739
Bacillota
CCG
Arg
>WENV180888305
ODMN01000424
183957
Bacillota
CCT
Arg
>WENV180888172
ODMN01000144
156730
Bacillota
ACG
Arg
>WENV180889186
ODMN01016708
156730
Bacillota
ACG
Arg
>WENV180888772
ODMN01003465
289713
Bacillota
TGT
Thr
>WENV180888830
ODMN01004184
404091
Bacillota
TTG
Gln
>WENV180888829
ODMN01004184
289716
Bacillota
GTG
His
>WENV180889952
ODMN01256445
459288
Bacillota
GCC
Gly
>WENV180887990
ODMN01000008
287380
Bacillota
CTT
Lys
>WENV180889654
ODMN01086252
323864
Bacillota
TGC
Ala
>WENV180889940
ODMN01254437
432453
Bacillota
TTC
Glu
>WENV180889045
ODMN01010302
480337
Bacillota
TCC
Gly
>WENV180889893
ODMN01220007
301649
Bacillota
TTT
Lys
>WENV180889179
ODMN01016599
179935
Bacillota
GTC
Asp
>WENV180889774
ODMN01136763
179935
Bacillota
GTC
Asp
>WENV180889958
ODMN01257996
179935
Bacillota
GTC
Asp
>WENV180889677
ODMN01096362
119459
Bacillota
TAG
Leu
>WENV180888325
ODMN01000457
333281
Bacillota
GTT
Asn
>WENV180888931
ODMN01006593
333281
Bacillota
GTT
Asn
>WENV180889950
ODMN01255859
333281
Bacillota
GTT
Asn
>WENV180888200
ODMN01000225
280547
Bacillota
GTC
Asp
>WENV180888695
ODMN01002601
280547
Bacillota
GTC
Asp
>WENV180888202
ODMN01000225
445407
Bacillota
GCC
Gly
>WENV180888324
ODMN01000457
445407
Bacillota
GCC
Gly
>WENV180889921
ODMN01251605
445407
Bacillota
GCC
Gly
>WENV180888326
ODMN01000457
289761
Bacillota
TTT
Lys
>WENV180888831
ODMN01004184
289761
Bacillota
TTT
Lys
>WENV180888182
ODMN01000183
403759
Bacillota
CTC
Glu
>WENV180889132
ODMN01013945
403759
Bacillota
CTC
Glu
>WENV180889391
ODMN01038624
403759
Bacillota
CTC
Glu
>WENV180889580
ODMN01064991
283367
Bacillota
GCC
Gly
>WENV180889941
ODMN01254437
289715
Bacillota
TAC
Val
>WENV180888546
ODMN01001575
20943
Bacillota
CGA
Ser
>WENV180888513
ODMN01001401
289123
Bacillota
GGT
Thr
>WENV180889724
ODMN01116603
118370
Bacillota
TAG
Leu
>WENV180889044
ODMN01010302
208539
Bacillota
TGG
Pro
>WENV180889046
ODMN01010302
184539
Bacillota
TCT
Arg
>WENV180888748
ODMN01003159
100945
Bacillota
CAG
Leu
>WENV180889184
ODMN01016599
100945
Bacillota
CAG
Leu
>WENV180889625
ODMN01077306
280486
Bacillota
TGC
Ala
>WENV180888267
ODMN01000348
289124
Bacillota
GTT
Asn
>WENV180889752
ODMN01130863
289124
Bacillota
GTT
Asn
>WENV180889048
ODMN01010440
482078
Bacillota
CCC
Gly
>WENV180889589
ODMN01067238
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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