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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180916529
ODTD01000157
291553
Bacillota
GAA
Phe
>WENV180916527
ODTD01000157
20942
Bacillota
GGA
Ser
>WENV180916528
ODTD01000157
280547
Bacillota
GTC
Asp
>WENV180916540
ODTD01000169
291553
Bacillota
GAA
Phe
>WENV180916539
ODTD01000169
280547
Bacillota
GTC
Asp
>WENV180916553
ODTD01000190
480337
Bacillota
TCC
Gly
>WENV180916555
ODTD01000190
20943
Bacillota
CGA
Ser
>WENV180916552
ODTD01000190
208539
Bacillota
TGG
Pro
>WENV180916554
ODTD01000190
184539
Bacillota
TCT
Arg
>WENV180916636
ODTD01000303
482593
Bacillota
CCC
Gly
>WENV180916643
ODTD01000318
119459
Bacillota
TAG
Leu
>WENV180916671
ODTD01000468
48505
Bacillota
TGA
Ser
>WENV180916676
ODTD01000479
432453
Bacillota
TTC
Glu
>WENV180916675
ODTD01000479
333281
Bacillota
GTT
Asn
>WENV180916677
ODTD01000479
289715
Bacillota
TAC
Val
>WENV180916699
ODTD01000571
141202
Bacillota
CAA
Leu
>WENV180916722
ODTD01000685
221826
Bacillota
ACG
Arg
>WENV180916758
ODTD01000955
141141
Bacillota
GTA
Tyr
>WENV180916840
ODTD01001514
20932
Bacillota
GCT
Ser
>WENV180916847
ODTD01001595
289717
Bacillota
CTT
Lys
>WENV180916850
ODTD01001648
178610
Bacillota
GTT
Asn
>WENV180916890
ODTD01001950
288834
Bacillota
TAC
Val
>WENV180916893
ODTD01001950
301649
Bacillota
TTT
Lys
>WENV180916891
ODTD01001950
141141
Bacillota
GTA
Tyr
>WENV180916888
ODTD01001950
178610
Bacillota
GTT
Asn
>WENV180916904
ODTD01002183
404091
Bacillota
TTG
Gln
>WENV180916903
ODTD01002183
289716
Bacillota
GTG
His
>WENV180916905
ODTD01002183
289761
Bacillota
TTT
Lys
>WENV180917056
ODTD01003900
296855
Bacillota
GGT
Thr
>WENV180917057
ODTD01003900
184495
Bacillota
CAT
Met
>WENV180917053
ODTD01003900
289713
Bacillota
TGT
Thr
>WENV180917063
ODTD01003945
288834
Bacillota
TAC
Val
>WENV180917076
ODTD01003945
283303
Bacillota
GTC
Asp
>WENV180917069
ODTD01003945
212982
Bacillota
ACG
Arg
>WENV180917065
ODTD01003945
301649
Bacillota
TTT
Lys
>WENV180917098
ODTD01004242
200563
Bacillota
TGG
Pro
>WENV180917091
ODTD01004242
412083
Bacillota
GTT
Asn
>WENV180917101
ODTD01004242
412083
Bacillota
GTT
Asn
>WENV180917094
ODTD01004242
418726
Bacillota
TGT
Thr
>WENV180917279
ODTD01010554
176014
Bacillota
TCT
Arg
>WENV180917293
ODTD01011587
321248
Bacillota
TAC
Val
>WENV180917380
ODTD01018114
283367
Bacillota
GCC
Gly
>WENV180917423
ODTD01022770
283303
Bacillota
GTC
Asp
>WENV180917420
ODTD01022770
178610
Bacillota
GTT
Asn
>WENV180917445
ODTD01025945
184537
Bacillota
ACG
Arg
>WENV180917449
ODTD01026453
280500
Bacillota
TGC
Ala
>WENV180917451
ODTD01026485
321248
Bacillota
TAC
Val
>WENV180917483
ODTD01032968
280486
Bacillota
TGC
Ala
>WENV180917485
ODTD01033408
408526
Bacillota
GCA
Cys
>WENV180917528
ODTD01039776
283622
Bacillota
CTT
Lys
>WENV180917539
ODTD01040795
280644
Bacillota
CCA
Trp
>WENV180917540
ODTD01040795
176017
Bacillota
GAT
Ile
>WENV180917542
ODTD01041076
187364
Bacillota
CAT
Met
>WENV180917579
ODTD01045688
418726
Bacillota
TGT
Thr
>WENV180917578
ODTD01045688
195133
Bacillota
GTC
Asp
>WENV180917617
ODTD01052794
339995
Bacillota
TGC
Ala
>WENV180917688
ODTD01075003
289154
Bacillota
CTT
Lys
>WENV180917716
ODTD01085902
444984
Bacillota
GCC
Gly
>WENV180917827
ODTD01150663
104114
Bacillota
CAG
Leu
>WENV180917828
ODTD01151590
280547
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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