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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180947106
ODUE01019212
280500
Bacillota
TGC
Ala
>WENV180947167
ODUE01042252
280428
Bacillota
GAA
Phe
>WENV180947224
ODUE01074512
291579
Bacillota
GAA
Phe
>WENV180947072
ODUE01013703
280492
Bacillota
CTT
Lys
>WENV180947100
ODUE01017815
179563
Bacillota
GAT
Ile
>WENV180947181
ODUE01045866
179176
Bacillota
ACG
Arg
>WENV180947099
ODUE01017815
295166
Bacillota
TGC
Ala
>WENV180947133
ODUE01029043
295166
Bacillota
TGC
Ala
>WENV180947048
ODUE01010590
190476
Bacillota
CAT
Met
>WENV180947097
ODUE01016105
280447
Bacillota
GAC
Val
>WENV180947155
ODUE01035626
5692
Bacillota
GCT
Ser
>WENV180947212
ODUE01068678
186123
Bacillota
GTC
Asp
>WENV180946908
ODUE01003180
175825
Bacillota
GAT
Ile
>WENV180946997
ODUE01007028
73009
Bacillota
CAG
Leu
>WENV180946907
ODUE01003180
280436
Bacillota
TGC
Ala
>WENV180947063
ODUE01012038
175847
Bacillota
GTC
Asp
>WENV180947093
ODUE01015816
175847
Bacillota
GTC
Asp
>WENV180947082
ODUE01014842
175831
Bacillota
ACG
Arg
>WENV180946787
ODUE01001006
284627
Bacillota
GAA
Phe
>WENV180947028
ODUE01008862
284627
Bacillota
GAA
Phe
>WENV180947227
ODUE01075581
284627
Bacillota
GAA
Phe
>WENV180947213
ODUE01068678
291634
Bacillota
GAA
Phe
>WENV180946843
ODUE01001671
294020
Bacillota
TAC
Val
>WENV180946841
ODUE01001671
294020
Bacillota
TAC
Val
>WENV180946966
ODUE01005316
484885
Bacillota
TCC
Gly
>WENV180947029
ODUE01008862
484885
Bacillota
TCC
Gly
>WENV180947127
ODUE01025833
480322
Bacillota
CTG
Gln
>WENV180947034
ODUE01009027
398854
Bacillota
CTC
Glu
>WENV180947088
ODUE01015409
287280
Bacillota
TGT
Thr
>WENV180947225
ODUE01074551
56079
Bacillota
AAG
Leu
>WENV180947240
ODUE01086233
175911
Bacillota
GTC
Asp
>WENV180946931
ODUE01003995
186051
Bacillota
GAT
Ile
>WENV180946932
ODUE01003996
398857
Bacillota
TTC
Glu
>WENV180947087
ODUE01015193
398857
Bacillota
TTC
Glu
>WENV180947119
ODUE01022439
398857
Bacillota
TTC
Glu
>WENV180947138
ODUE01029512
280444
Bacillota
GGT
Thr
>WENV180947175
ODUE01043577
291650
Bacillota
TGC
Ala
>WENV180947238
ODUE01083989
289761
Bacillota
TTT
Lys
>WENV180947049
ODUE01010590
398832
Bacillota
TTC
Glu
>WENV180946960
ODUE01005125
118669
Bacillota
GTA
Tyr
>WENV180947096
ODUE01015816
118669
Bacillota
GTA
Tyr
>WENV180946991
ODUE01006408
294275
Bacillota
TGC
Ala
>WENV180947235
ODUE01081271
280462
Bacillota
GAA
Phe
>WENV180946815
ODUE01001258
289123
Bacillota
GGT
Thr
>WENV180947189
ODUE01051242
280483
Bacillota
GAA
Phe
>WENV180947109
ODUE01020052
175857
Bacillota
GTG
His
>WENV180947108
ODUE01019852
398833
Bacillota
TGT
Thr
>WENV180947137
ODUE01029512
175849
Bacillota
GTC
Asp
>WENV180947203
ODUE01060953
179166
Bacillota
TCT
Arg
>WENV180947141
ODUE01030339
280486
Bacillota
TGC
Ala
>WENV180947214
ODUE01068678
405393
Bacillota
GCC
Gly
>WENV180947239
ODUE01086120
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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