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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180958492
ODUL01006407
243647
Bacillota
TTT
Lys
>WENV180958758
ODUL01035398
178679
Bacillota
CAT
Met
>WENV180958390
ODUL01003745
389888
Bacillota
GCC
Gly
>WENV180958388
ODUL01003745
308424
Bacillota
TTT
Lys
>WENV180958424
ODUL01004318
308424
Bacillota
TTT
Lys
>WENV180958330
ODUL01002997
391536
Bacillota
TTC
Glu
>WENV180958812
ODUL01059163
16834
Bacillota
GCT
Ser
>WENV180958381
ODUL01003576
114002
Bacillota
CAA
Leu
>WENV180958770
ODUL01038560
37437
Bacillota
TAA
Leu
>WENV180958392
ODUL01003745
162028
Bacillota
ACG
Arg
>WENV180958930
ODUL01133461
113951
Bacillota
GTA
Tyr
>WENV180958924
ODUL01129676
113951
Bacillota
GTA
Tyr
>WENV180958514
ODUL01007012
113951
Bacillota
GTA
Tyr
>WENV180958331
ODUL01002997
243612
Bacillota
TAC
Val
>WENV180958449
ODUL01005161
338676
Bacillota
CCG
Arg
>WENV180958437
ODUL01004761
147135
Bacillota
ACG
Arg
>WENV180958910
ODUL01123263
242848
Bacillota
GAA
Phe
>WENV180958696
ODUL01023764
242848
Bacillota
GAA
Phe
>WENV180958637
ODUL01015498
342895
Bacillota
CAT
Met
>WENV180958281
ODUL01002014
190275
Bacillota
TCT
Arg
>WENV180958648
ODUL01017921
194150
Bacillota
TGG
Pro
>WENV180958754
ODUL01035343
235197
Bacillota
GTC
Asp
>WENV180958768
ODUL01038560
368876
Bacillota
GCC
Gly
>WENV180958765
ODUL01037751
147183
Bacillota
GTT
Asn
>WENV180958665
ODUL01018747
147183
Bacillota
GTT
Asn
>WENV180958490
ODUL01006407
243613
Bacillota
GTG
His
>WENV180958732
ODUL01028444
152491
Bacillota
CAT
Met
>WENV180958536
ODUL01007841
74162
Bacillota
CAA
Leu
>WENV180958731
ODUL01028444
281472
Bacillota
GGT
Thr
>WENV180958650
ODUL01017921
178024
Bacillota
TCT
Arg
>WENV180958329
ODUL01002997
287034
Bacillota
GTT
Asn
>WENV180958491
ODUL01006407
343027
Bacillota
TTG
Gln
>WENV180958705
ODUL01024493
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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