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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181027274
ODXD01000047
187706
Bacillota
TGG
Pro
>WENV181027297
ODXD01000077
288834
Bacillota
TAC
Val
>WENV181027310
ODXD01000077
283303
Bacillota
GTC
Asp
>WENV181027313
ODXD01000077
141141
Bacillota
GTA
Tyr
>WENV181027390
ODXD01000704
20942
Bacillota
GGA
Ser
>WENV181027396
ODXD01000786
178627
Bacillota
TCT
Arg
>WENV181027412
ODXD01001118
141141
Bacillota
GTA
Tyr
>WENV181027440
ODXD01002134
183970
Bacillota
GTT
Asn
>WENV181027458
ODXD01002815
289715
Bacillota
TAC
Val
>WENV181027467
ODXD01003134
482593
Bacillota
CCC
Gly
>WENV181027468
ODXD01003142
400041
Bacillota
CCG
Arg
>WENV181027493
ODXD01004168
20932
Bacillota
GCT
Ser
>WENV181027500
ODXD01004579
283622
Bacillota
CTT
Lys
>WENV181027526
ODXD01006731
480337
Bacillota
TCC
Gly
>WENV181027532
ODXD01006997
184537
Bacillota
ACG
Arg
>WENV181027570
ODXD01010619
20943
Bacillota
CGA
Ser
>WENV181027573
ODXD01010791
289717
Bacillota
CTT
Lys
>WENV181027598
ODXD01013794
404091
Bacillota
TTG
Gln
>WENV181027597
ODXD01013794
289716
Bacillota
GTG
His
>WENV181027599
ODXD01013794
289761
Bacillota
TTT
Lys
>WENV181027619
ODXD01016288
141202
Bacillota
CAA
Leu
>WENV181027623
ODXD01017166
47161
Bacillota
>WENV181027624
ODXD01017225
398936
Bacillota
CCT
Arg
>WENV181027648
ODXD01020385
280486
Bacillota
TGC
Ala
>WENV181027698
ODXD01031695
184495
Bacillota
CAT
Met
>WENV181027700
ODXD01032358
481163
Bacillota
TCC
Gly
>WENV181027729
ODXD01036583
288834
Bacillota
TAC
Val
>WENV181027730
ODXD01036583
141141
Bacillota
GTA
Tyr
>WENV181027727
ODXD01036583
178610
Bacillota
GTT
Asn
>WENV181027746
ODXD01041289
183970
Bacillota
GTT
Asn
>WENV181027816
ODXD01066319
29930
Bacillota
GGA
Ser
>WENV181027827
ODXD01069857
283367
Bacillota
GCC
Gly
>WENV181027828
ODXD01070151
178610
Bacillota
GTT
Asn
>WENV181027899
ODXD01107032
289761
Bacillota
TTT
Lys
>WENV181027922
ODXD01124800
184539
Bacillota
TCT
Arg
>WENV181027943
ODXD01140143
289713
Bacillota
TGT
Thr
>WENV181027974
ODXD01164431
291553
Bacillota
GAA
Phe
>WENV181027973
ODXD01164431
280547
Bacillota
GTC
Asp
>WENV181027985
ODXD01165711
183970
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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