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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181066373
ODZI01000004
100696
Bacillota
GTA
Tyr
>WENV181066376
ODZI01000004
187458
Bacillota
CAT
Met
>WENV181066377
ODZI01000004
287380
Bacillota
CTT
Lys
>WENV181066375
ODZI01000004
289123
Bacillota
GGT
Thr
>WENV181066431
ODZI01000030
141202
Bacillota
CAA
Leu
>WENV181066464
ODZI01000055
48505
Bacillota
TGA
Ser
>WENV181066467
ODZI01000068
289717
Bacillota
CTT
Lys
>WENV181066495
ODZI01000080
480337
Bacillota
TCC
Gly
>WENV181066493
ODZI01000080
20943
Bacillota
CGA
Ser
>WENV181066496
ODZI01000080
184539
Bacillota
TCT
Arg
>WENV181066507
ODZI01000097
402739
Bacillota
CCG
Arg
>WENV181066508
ODZI01000105
156730
Bacillota
ACG
Arg
>WENV181066509
ODZI01000109
403759
Bacillota
CTC
Glu
>WENV181066532
ODZI01000144
183957
Bacillota
CCT
Arg
>WENV181066535
ODZI01000146
408526
Bacillota
GCA
Cys
>WENV181066543
ODZI01000164
100696
Bacillota
GTA
Tyr
>WENV181066546
ODZI01000164
187458
Bacillota
CAT
Met
>WENV181066545
ODZI01000164
289123
Bacillota
GGT
Thr
>WENV181066550
ODZI01000200
20942
Bacillota
GGA
Ser
>WENV181066577
ODZI01000263
293309
Bacillota
GTT
Asn
>WENV181066578
ODZI01000263
289761
Bacillota
TTT
Lys
>WENV181066580
ODZI01000263
289715
Bacillota
TAC
Val
>WENV181066685
ODZI01000954
404126
Bacillota
GCC
Gly
>WENV181066699
ODZI01001033
482593
Bacillota
CCC
Gly
>WENV181066735
ODZI01001327
20932
Bacillota
GCT
Ser
>WENV181066784
ODZI01001810
284746
Bacillota
CTG
Gln
>WENV181066811
ODZI01002038
184537
Bacillota
ACG
Arg
>WENV181066823
ODZI01002172
178152
Bacillota
GTT
Asn
>WENV181066834
ODZI01002324
289121
Bacillota
CCA
Trp
>WENV181066833
ODZI01002324
287508
Bacillota
GTG
His
>WENV181067015
ODZI01004825
296855
Bacillota
GGT
Thr
>WENV181067016
ODZI01004825
184495
Bacillota
CAT
Met
>WENV181067012
ODZI01004825
289713
Bacillota
TGT
Thr
>WENV181067046
ODZI01005362
404091
Bacillota
TTG
Gln
>WENV181067045
ODZI01005362
289716
Bacillota
GTG
His
>WENV181067136
ODZI01007583
283622
Bacillota
CTT
Lys
>WENV181067261
ODZI01010792
119459
Bacillota
TAG
Leu
>WENV181067331
ODZI01013287
293309
Bacillota
GTT
Asn
>WENV181067333
ODZI01013287
289715
Bacillota
TAC
Val
>WENV181067344
ODZI01013952
178627
Bacillota
TCT
Arg
>WENV181067361
ODZI01014706
293559
Bacillota
TGC
Ala
>WENV181067393
ODZI01016093
400041
Bacillota
CCG
Arg
>WENV181067448
ODZI01018985
289124
Bacillota
GTT
Asn
>WENV181067660
ODZI01035759
178152
Bacillota
GTT
Asn
>WENV181067799
ODZI01055635
178610
Bacillota
GTT
Asn
>WENV181067820
ODZI01058347
287643
Bacillota
TAC
Val
>WENV181067819
ODZI01058347
287380
Bacillota
CTT
Lys
>WENV181067822
ODZI01058347
284742
Bacillota
GAA
Phe
>WENV181067816
ODZI01058347
289124
Bacillota
GTT
Asn
>WENV181067934
ODZI01076750
280486
Bacillota
TGC
Ala
>WENV181068010
ODZI01099244
156730
Bacillota
ACG
Arg
>WENV181068042
ODZI01106096
398936
Bacillota
CCT
Arg
>WENV181068113
ODZI01129033
100945
Bacillota
CAG
Leu
>WENV181068234
ODZI01195383
283367
Bacillota
GCC
Gly
>WENV181068243
ODZI01203147
141141
Bacillota
GTA
Tyr
>WENV181068318
ODZI01271538
291553
Bacillota
GAA
Phe
>WENV181068325
ODZI01272620
404126
Bacillota
GCC
Gly
>WENV181068326
ODZI01272620
404126
Bacillota
GCC
Gly
>WENV181068341
ODZI01286178
280547
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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