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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181073038
OEAN01120872
235519
Bacillota
TAC
Val
>WENV181071984
OEAN01000371
144612
Bacillota
TCT
Arg
>WENV181072727
OEAN01021053
144612
Bacillota
TCT
Arg
>WENV181072788
OEAN01027134
144612
Bacillota
TCT
Arg
>WENV181072534
OEAN01005472
235134
Bacillota
GAA
Phe
>WENV181072850
OEAN01037221
267556
Bacillota
TAC
Val
>WENV181073046
OEAN01124936
267556
Bacillota
TAC
Val
>WENV181072029
OEAN01000441
235098
Bacillota
GAC
Val
>WENV181072520
OEAN01005001
235098
Bacillota
GAC
Val
>WENV181072632
OEAN01010217
235098
Bacillota
GAC
Val
>WENV181071838
OEAN01000167
338152
Bacillota
TTC
Glu
>WENV181072910
OEAN01059197
338152
Bacillota
TTC
Glu
>WENV181072971
OEAN01082229
338152
Bacillota
TTC
Glu
>WENV181072372
OEAN01002206
148239
Bacillota
TCT
Arg
>WENV181072122
OEAN01000664
44854
Bacillota
TGA
Ser
>WENV181072647
OEAN01011818
246023
Bacillota
TGC
Ala
>WENV181071654
OEAN01000036
59312
Bacillota
CAG
Leu
>WENV181072995
OEAN01098588
238910
Bacillota
CTT
Lys
>WENV181072524
OEAN01005094
238910
Bacillota
CTT
Lys
>WENV181071738
OEAN01000084
338147
Bacillota
CTC
Glu
>WENV181071737
OEAN01000084
338147
Bacillota
CTC
Glu
>WENV181071736
OEAN01000084
338147
Bacillota
CTC
Glu
>WENV181072868
OEAN01042182
235150
Bacillota
TGC
Ala
>WENV181072839
OEAN01035554
235150
Bacillota
TGC
Ala
>WENV181072836
OEAN01035005
235137
Bacillota
TGC
Ala
>WENV181072783
OEAN01026815
340802
Bacillota
TTG
Gln
>WENV181072211
OEAN01000957
341763
Bacillota
CTC
Glu
>WENV181072592
OEAN01007837
175676
Bacillota
GAT
Ile
>WENV181073063
OEAN01138323
37083
Bacillota
TGA
Ser
>WENV181072939
OEAN01071682
144668
Bacillota
GTC
Asp
>WENV181072483
OEAN01003920
144668
Bacillota
GTC
Asp
>WENV181072887
OEAN01051607
182792
Bacillota
GTC
Asp
>WENV181072277
OEAN01001353
182792
Bacillota
GTC
Asp
>WENV181072120
OEAN01000664
182792
Bacillota
GTC
Asp
>WENV181073054
OEAN01130865
44859
Bacillota
AAG
Leu
>WENV181072389
OEAN01002543
11034
Bacillota
GGA
Ser
>WENV181072886
OEAN01051607
235117
Bacillota
TAC
Val
>WENV181072733
OEAN01021292
235117
Bacillota
TAC
Val
>WENV181072492
OEAN01004209
235117
Bacillota
TAC
Val
>WENV181072276
OEAN01001353
235117
Bacillota
TAC
Val
>WENV181072709
OEAN01018215
274189
Bacillota
TGT
Thr
>WENV181073113
OEAN01168368
235079
Bacillota
GAA
Phe
>WENV181073060
OEAN01137415
235079
Bacillota
GAA
Phe
>WENV181072888
OEAN01051607
235079
Bacillota
GAA
Phe
>WENV181072454
OEAN01003381
235079
Bacillota
GAA
Phe
>WENV181072974
OEAN01082301
162028
Bacillota
ACG
Arg
>WENV181072743
OEAN01022466
173314
Bacillota
GAT
Ile
>WENV181072688
OEAN01016019
173314
Bacillota
GAT
Ile
>WENV181072879
OEAN01048804
338149
Bacillota
CTC
Glu
>WENV181071990
OEAN01000377
338149
Bacillota
CTC
Glu
>WENV181072829
OEAN01033732
271471
Bacillota
GCC
Gly
>WENV181072261
OEAN01001277
245298
Bacillota
CGG
Pro
>WENV181072513
OEAN01004683
37269
Bacillota
TGA
Ser
>WENV181072909
OEAN01059197
287000
Bacillota
GTT
Asn
>WENV181072543
OEAN01005868
287000
Bacillota
GTT
Asn
>WENV181072429
OEAN01003168
413152
Bacillota
TCC
Gly
>WENV181072065
OEAN01000515
162445
Bacillota
CAT
Met
>WENV181072614
OEAN01009284
100326
Bacillota
GTA
Tyr
>WENV181072438
OEAN01003211
100326
Bacillota
GTA
Tyr
>WENV181071951
OEAN01000316
100326
Bacillota
GTA
Tyr
>WENV181071835
OEAN01000167
100326
Bacillota
GTA
Tyr
>WENV181071661
OEAN01000040
100326
Bacillota
GTA
Tyr
>WENV181072373
OEAN01002206
144610
Bacillota
GTG
His
>WENV181072535
OEAN01005472
240017
Bacillota
GCC
Gly
>WENV181072464
OEAN01003509
411547
Bacillota
CTG
Gln
>WENV181072260
OEAN01001277
411547
Bacillota
CTG
Gln
>WENV181072762
OEAN01024260
147684
Bacillota
ACG
Arg
>WENV181072123
OEAN01000664
4624
Bacillota
GCT
Ser
>WENV181072532
OEAN01005472
263765
Bacillota
TAC
Val
>WENV181072427
OEAN01003151
263765
Bacillota
TAC
Val
>WENV181072356
OEAN01001968
263765
Bacillota
TAC
Val
>WENV181072179
OEAN01000823
18852
Bacillota
GCT
Ser
>WENV181072042
OEAN01000459
18852
Bacillota
GCT
Ser
>WENV181072335
OEAN01001697
235095
Bacillota
GGT
Thr
>WENV181072121
OEAN01000664
235095
Bacillota
GGT
Thr
>WENV181072973
OEAN01082301
37193
Bacillota
TAA
Leu
>WENV181072136
OEAN01000679
419639
Bacillota
GCA
Cys
>WENV181072294
OEAN01001451
411549
Bacillota
TTG
Gln
>WENV181073012
OEAN01106335
154711
Bacillota
TGG
Pro
>WENV181072478
OEAN01003749
148188
Bacillota
CCG
Arg
>WENV181072385
OEAN01002479
148188
Bacillota
CCG
Arg
>WENV181072018
OEAN01000422
235127
Bacillota
TTT
Lys
>WENV181071938
OEAN01000295
235127
Bacillota
TTT
Lys
>WENV181072015
OEAN01000422
147674
Bacillota
TCT
Arg
>WENV181072911
OEAN01059197
241432
Bacillota
TGT
Thr
>WENV181072008
OEAN01000406
235124
Bacillota
TGG
Pro
>WENV181072027
OEAN01000433
338129
Bacillota
TGT
Thr
>WENV181071992
OEAN01000377
144583
Bacillota
ACG
Arg
>WENV181072992
OEAN01094916
144652
Bacillota
GTC
Asp
>WENV181073044
OEAN01124932
247734
Bacillota
TGC
Ala
>WENV181071953
OEAN01000316
419877
Bacillota
TCC
Gly
>WENV181071904
OEAN01000246
419877
Bacillota
TCC
Gly
>WENV181072119
OEAN01000664
235171
Bacillota
CCA
Trp
>WENV181073005
OEAN01102472
238974
Bacillota
GAA
Phe
>WENV181072227
OEAN01001023
144621
Bacillota
GTT
Asn
>WENV181071991
OEAN01000377
144621
Bacillota
GTT
Asn
>WENV181071765
OEAN01000108
277200
Bacillota
GGC
Ala
>WENV181071819
OEAN01000150
243098
Bacillota
GGT
Thr
>WENV181072502
OEAN01004371
58712
Bacillota
CAG
Leu
>WENV181072118
OEAN01000664
58712
Bacillota
CAG
Leu
>WENV181072169
OEAN01000772
245296
Bacillota
CCC
Gly
>WENV181072880
OEAN01048804
272992
Bacillota
CTT
Lys
>WENV181072135
OEAN01000679
344240
Bacillota
GCC
Gly
>WENV181071850
OEAN01000183
344240
Bacillota
GCC
Gly
>WENV181071711
OEAN01000068
344240
Bacillota
GCC
Gly
>WENV181072453
OEAN01003341
144594
Bacillota
CAC
Val
>WENV181073107
OEAN01167857
272488
Bacillota
GAA
Phe
>WENV181071937
OEAN01000295
272488
Bacillota
GAA
Phe
>WENV181071944
OEAN01000300
238945
Bacillota
GCC
Gly
>WENV181071943
OEAN01000300
238945
Bacillota
GCC
Gly
>WENV181072732
OEAN01021292
249259
Bacillota
GCC
Gly
>WENV181072689
OEAN01016144
249259
Bacillota
GCC
Gly
>WENV181072491
OEAN01004209
249259
Bacillota
GCC
Gly
>WENV181072455
OEAN01003381
249259
Bacillota
GCC
Gly
>WENV181072278
OEAN01001353
249259
Bacillota
GCC
Gly
>WENV181072475
OEAN01003740
273862
Bacillota
TGC
Ala
>WENV181072361
OEAN01002058
338131
Bacillota
GCC
Gly
>WENV181072979
OEAN01083894
237388
Bacillota
GTG
His
>WENV181073056
OEAN01131557
338128
Bacillota
TTC
Glu
>WENV181072907
OEAN01058808
338128
Bacillota
TTC
Glu
>WENV181072134
OEAN01000679
245344
Bacillota
GAA
Phe
>WENV181072037
OEAN01000450
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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