This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181075746
OEAP01000263
184537
Bacillota
ACG
Arg
>WENV181076618
OEAP01008805
221826
Bacillota
ACG
Arg
>WENV181077193
OEAP01031672
221826
Bacillota
ACG
Arg
>WENV181076667
OEAP01010055
156730
Bacillota
ACG
Arg
>WENV181075687
OEAP01000146
141202
Bacillota
CAA
Leu
>WENV181076478
OEAP01005732
100945
Bacillota
CAG
Leu
>WENV181075611
OEAP01000066
187458
Bacillota
CAT
Met
>WENV181076269
OEAP01003145
187458
Bacillota
CAT
Met
>WENV181075609
OEAP01000066
356355
Bacillota
CAT
Met
>WENV181076265
OEAP01003145
356355
Bacillota
CAT
Met
>WENV181076267
OEAP01003145
356355
Bacillota
CAT
Met
>WENV181075727
OEAP01000203
184495
Bacillota
CAT
Met
>WENV181077606
OEAP01086372
195913
Bacillota
CAT
Met
>WENV181077479
OEAP01062465
219187
Bacillota
CAT
Met
>WENV181077587
OEAP01081750
219187
Bacillota
CAT
Met
>WENV181077343
OEAP01043771
289121
Bacillota
CCA
Trp
>WENV181075761
OEAP01000273
482593
Bacillota
CCC
Gly
>WENV181077566
OEAP01074456
482078
Bacillota
CCC
Gly
>WENV181075631
OEAP01000086
402739
Bacillota
CCG
Arg
>WENV181076758
OEAP01013042
402739
Bacillota
CCG
Arg
>WENV181075994
OEAP01001106
400041
Bacillota
CCG
Arg
>WENV181076058
OEAP01001525
183957
Bacillota
CCT
Arg
>WENV181076907
OEAP01017279
183957
Bacillota
CCT
Arg
>WENV181075577
OEAP01000041
20943
Bacillota
CGA
Ser
>WENV181075671
OEAP01000134
403759
Bacillota
CTC
Glu
>WENV181075672
OEAP01000134
403759
Bacillota
CTC
Glu
>WENV181076909
OEAP01017336
403759
Bacillota
CTC
Glu
>WENV181075720
OEAP01000196
289717
Bacillota
CTT
Lys
>WENV181076568
OEAP01007752
283622
Bacillota
CTT
Lys
>WENV181075612
OEAP01000066
287380
Bacillota
CTT
Lys
>WENV181076470
OEAP01005732
287380
Bacillota
CTT
Lys
>WENV181076643
OEAP01009490
287380
Bacillota
CTT
Lys
>WENV181076972
OEAP01019413
287380
Bacillota
CTT
Lys
>WENV181075491
OEAP01000009
291553
Bacillota
GAA
Phe
>WENV181075578
OEAP01000041
291553
Bacillota
GAA
Phe
>WENV181076473
OEAP01005732
338033
Bacillota
GAA
Phe
>WENV181076655
OEAP01009704
338033
Bacillota
GAA
Phe
>WENV181075493
OEAP01000009
408526
Bacillota
GCA
Cys
>WENV181077053
OEAP01023046
343590
Bacillota
GCC
Gly
>WENV181077279
OEAP01038180
343590
Bacillota
GCC
Gly
>WENV181077976
OEAP01260537
452735
Bacillota
GCC
Gly
>WENV181075492
OEAP01000009
445407
Bacillota
GCC
Gly
>WENV181075613
OEAP01000067
445407
Bacillota
GCC
Gly
>WENV181077314
OEAP01041688
283367
Bacillota
GCC
Gly
>WENV181077942
OEAP01249489
283367
Bacillota
GCC
Gly
>WENV181075553
OEAP01000029
20932
Bacillota
GCT
Ser
>WENV181077627
OEAP01094141
25955
Bacillota
GCT
Ser
>WENV181077752
OEAP01128761
25955
Bacillota
GCT
Ser
>WENV181075545
OEAP01000026
20942
Bacillota
GGA
Ser
>WENV181075726
OEAP01000203
296855
Bacillota
GGT
Thr
>WENV181075610
OEAP01000066
289123
Bacillota
GGT
Thr
>WENV181076268
OEAP01003145
289123
Bacillota
GGT
Thr
>WENV181075608
OEAP01000066
100696
Bacillota
GTA
Tyr
>WENV181076266
OEAP01003145
100696
Bacillota
GTA
Tyr
>WENV181077897
OEAP01218913
141141
Bacillota
GTA
Tyr
>WENV181075490
OEAP01000009
280547
Bacillota
GTC
Asp
>WENV181076596
OEAP01008356
280547
Bacillota
GTC
Asp
>WENV181077342
OEAP01043771
287508
Bacillota
GTG
His
>WENV181075617
OEAP01000067
289716
Bacillota
GTG
His
>WENV181075614
OEAP01000067
333281
Bacillota
GTT
Asn
>WENV181076467
OEAP01005732
289124
Bacillota
GTT
Asn
>WENV181076828
OEAP01015012
289124
Bacillota
GTT
Asn
>WENV181077497
OEAP01063578
289124
Bacillota
GTT
Asn
>WENV181077794
OEAP01145803
289124
Bacillota
GTT
Asn
>WENV181077920
OEAP01240441
289124
Bacillota
GTT
Asn
>WENV181076471
OEAP01005732
287643
Bacillota
TAC
Val
>WENV181075616
OEAP01000067
289715
Bacillota
TAC
Val
>WENV181075747
OEAP01000263
119459
Bacillota
TAG
Leu
>WENV181075581
OEAP01000041
480337
Bacillota
TCC
Gly
>WENV181075663
OEAP01000126
178627
Bacillota
TCT
Arg
>WENV181075582
OEAP01000041
184539
Bacillota
TCT
Arg
>WENV181077740
OEAP01124890
295166
Bacillota
TGC
Ala
>WENV181077122
OEAP01026655
339995
Bacillota
TGC
Ala
>WENV181077262
OEAP01036395
280486
Bacillota
TGC
Ala
>WENV181077714
OEAP01115731
280486
Bacillota
TGC
Ala
>WENV181077967
OEAP01260127
280486
Bacillota
TGC
Ala
>WENV181077013
OEAP01021417
288728
Bacillota
TGC
Ala
>WENV181077475
OEAP01062465
176015
Bacillota
TGG
Pro
>WENV181077477
OEAP01062465
176015
Bacillota
TGG
Pro
>WENV181075580
OEAP01000041
208539
Bacillota
TGG
Pro
>WENV181075723
OEAP01000203
289713
Bacillota
TGT
Thr
>WENV181076653
OEAP01009704
409321
Bacillota
TTC
Glu
>WENV181075615
OEAP01000067
432453
Bacillota
TTC
Glu
>WENV181075618
OEAP01000067
404091
Bacillota
TTG
Gln
>WENV181075619
OEAP01000067
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK