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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181179186
OEJT01001789
289121
Bacillota
CCA
Trp
>WENV181178748
OEJT01000204
184537
Bacillota
ACG
Arg
>WENV181178418
OEJT01000009
408526
Bacillota
GCA
Cys
>WENV181178551
OEJT01000052
296855
Bacillota
GGT
Thr
>WENV181179185
OEJT01001789
287508
Bacillota
GTG
His
>WENV181178486
OEJT01000024
48505
Bacillota
TGA
Ser
>WENV181179521
OEJT01006783
284746
Bacillota
CTG
Gln
>WENV181178514
OEJT01000038
289717
Bacillota
CTT
Lys
>WENV181178601
OEJT01000085
20932
Bacillota
GCT
Ser
>WENV181178416
OEJT01000009
291553
Bacillota
GAA
Phe
>WENV181178685
OEJT01000148
291553
Bacillota
GAA
Phe
>WENV181179528
OEJT01006872
283622
Bacillota
CTT
Lys
>WENV181180048
OEJT01058680
295166
Bacillota
TGC
Ala
>WENV181178577
OEJT01000067
482593
Bacillota
CCC
Gly
>WENV181178414
OEJT01000007
20942
Bacillota
GGA
Ser
>WENV181179827
OEJT01020261
409321
Bacillota
TTC
Glu
>WENV181180104
OEJT01080839
184171
Bacillota
CAT
Met
>WENV181178744
OEJT01000203
100696
Bacillota
GTA
Tyr
>WENV181180277
OEJT01186285
100696
Bacillota
GTA
Tyr
>WENV181179202
OEJT01001937
287643
Bacillota
TAC
Val
>WENV181178745
OEJT01000203
187458
Bacillota
CAT
Met
>WENV181179534
OEJT01007019
187458
Bacillota
CAT
Met
>WENV181180156
OEJT01095241
187458
Bacillota
CAT
Met
>WENV181178552
OEJT01000052
184495
Bacillota
CAT
Met
>WENV181178381
OEJT01000003
141202
Bacillota
CAA
Leu
>WENV181179611
OEJT01009694
402739
Bacillota
CCG
Arg
>WENV181180253
OEJT01161840
211996
Bacillota
CAT
Met
>WENV181180149
OEJT01092500
176015
Bacillota
TGG
Pro
>WENV181179155
OEJT01001632
178152
Bacillota
GTT
Asn
>WENV181179225
OEJT01002116
178152
Bacillota
GTT
Asn
>WENV181179454
OEJT01005259
178152
Bacillota
GTT
Asn
>WENV181180138
OEJT01089776
178152
Bacillota
GTT
Asn
>WENV181179390
OEJT01004260
183957
Bacillota
CCT
Arg
>WENV181179682
OEJT01011697
156730
Bacillota
ACG
Arg
>WENV181180178
OEJT01107733
156730
Bacillota
ACG
Arg
>WENV181179100
OEJT01001346
178627
Bacillota
TCT
Arg
>WENV181178548
OEJT01000052
289713
Bacillota
TGT
Thr
>WENV181178623
OEJT01000094
404091
Bacillota
TTG
Gln
>WENV181178622
OEJT01000094
289716
Bacillota
GTG
His
>WENV181178746
OEJT01000203
287380
Bacillota
CTT
Lys
>WENV181179201
OEJT01001937
287380
Bacillota
CTT
Lys
>WENV181178688
OEJT01000148
480337
Bacillota
TCC
Gly
>WENV181180070
OEJT01066305
195913
Bacillota
CAT
Met
>WENV181179205
OEJT01001937
404126
Bacillota
GCC
Gly
>WENV181180299
OEJT01194172
404126
Bacillota
GCC
Gly
>WENV181178749
OEJT01000204
119459
Bacillota
TAG
Leu
>WENV181178415
OEJT01000009
280547
Bacillota
GTC
Asp
>WENV181178684
OEJT01000148
280547
Bacillota
GTC
Asp
>WENV181178624
OEJT01000094
289761
Bacillota
TTT
Lys
>WENV181178732
OEJT01000196
289761
Bacillota
TTT
Lys
>WENV181179782
OEJT01017443
403759
Bacillota
CTC
Glu
>WENV181179204
OEJT01001937
284742
Bacillota
GAA
Phe
>WENV181178547
OEJT01000052
289715
Bacillota
TAC
Val
>WENV181178734
OEJT01000196
289715
Bacillota
TAC
Val
>WENV181178683
OEJT01000148
20943
Bacillota
CGA
Ser
>WENV181179813
OEJT01019582
411059
Bacillota
GCC
Gly
>WENV181179533
OEJT01007019
289123
Bacillota
GGT
Thr
>WENV181178687
OEJT01000148
208539
Bacillota
TGG
Pro
>WENV181178689
OEJT01000148
184539
Bacillota
TCT
Arg
>WENV181179448
OEJT01005026
100945
Bacillota
CAG
Leu
>WENV181179975
OEJT01039903
280486
Bacillota
TGC
Ala
>WENV181180184
OEJT01110463
280486
Bacillota
TGC
Ala
>WENV181179198
OEJT01001937
289124
Bacillota
GTT
Asn
>WENV181180255
OEJT01162027
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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