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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181254733
OFFR01042674
238151
Bacillota
>WENV181254389
OFFR01005839
412118
Bacillota
>WENV181254816
OFFR01071774
147487
Bacillota
ACG
Arg
>WENV181254575
OFFR01018804
147684
Bacillota
ACG
Arg
>WENV181254423
OFFR01006989
147684
Bacillota
ACG
Arg
>WENV181254191
OFFR01001124
147684
Bacillota
ACG
Arg
>WENV181254393
OFFR01005839
45160
Bacillota
CAA
Leu
>WENV181254140
OFFR01000728
59312
Bacillota
CAG
Leu
>WENV181254269
OFFR01002134
245386
Bacillota
CCA
Trp
>WENV181254429
OFFR01007452
147276
Bacillota
CCT
Arg
>WENV181253941
OFFR01000081
16359
Bacillota
CGA
Ser
>WENV181254497
OFFR01011829
247786
Bacillota
CGT
Thr
>WENV181254504
OFFR01012032
361897
Bacillota
CTC
Glu
>WENV181254215
OFFR01001459
240192
Bacillota
CTG
Gln
>WENV181254061
OFFR01000345
277175
Bacillota
CTT
Lys
>WENV181254302
OFFR01002491
238974
Bacillota
GAA
Phe
>WENV181254470
OFFR01011072
272488
Bacillota
GAA
Phe
>WENV181254049
OFFR01000303
272488
Bacillota
GAA
Phe
>WENV181254356
OFFR01004190
238945
Bacillota
GCC
Gly
>WENV181254425
OFFR01007086
18852
Bacillota
GCT
Ser
>WENV181254044
OFFR01000298
18852
Bacillota
GCT
Ser
>WENV181254495
OFFR01011829
3271
Bacillota
GGA
Ser
>WENV181254169
OFFR01000933
247747
Bacillota
GGT
Thr
>WENV181254646
OFFR01028290
235095
Bacillota
GGT
Thr
>WENV181254252
OFFR01001925
85288
Bacillota
GTA
Tyr
>WENV181254802
OFFR01066610
144668
Bacillota
GTC
Asp
>WENV181254645
OFFR01028290
157838
Bacillota
GTC
Asp
>WENV181254732
OFFR01042674
279755
Bacillota
GTC
Asp
>WENV181254329
OFFR01003125
156937
Bacillota
GTG
His
>WENV181254390
OFFR01005839
237266
Bacillota
GTG
His
>WENV181254494
OFFR01011829
237957
Bacillota
GTT
Asn
>WENV181254608
OFFR01023221
235154
Bacillota
GTT
Asn
>WENV181253877
OFFR01000017
267556
Bacillota
TAC
Val
>WENV181254456
OFFR01009770
267556
Bacillota
TAC
Val
>WENV181254812
OFFR01071774
96015
Bacillota
TAG
Leu
>WENV181254751
OFFR01046113
413152
Bacillota
TCC
Gly
>WENV181254475
OFFR01011142
147674
Bacillota
TCT
Arg
>WENV181254730
OFFR01042674
6950
Bacillota
TGA
Ser
>WENV181254657
OFFR01030620
242686
Bacillota
TGC
Ala
>WENV181254813
OFFR01071774
247849
Bacillota
TGT
Thr
>WENV181254496
OFFR01011829
339151
Bacillota
TTC
Glu
>WENV181254477
OFFR01011142
339890
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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