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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181257490
OFFU01001195
343590
Bacillota
GCC
Gly
>WENV181257289
OFFU01000516
356660
Bacillota
CTT
Lys
>WENV181257290
OFFU01000516
356660
Bacillota
CTT
Lys
>WENV181257982
OFFU01016823
356660
Bacillota
CTT
Lys
>WENV181257370
OFFU01000747
56397
Bacillota
CAA
Leu
>WENV181257238
OFFU01000388
285945
Bacillota
TTT
Lys
>WENV181257785
OFFU01005058
141454
Bacillota
TAG
Leu
>WENV181257779
OFFU01005058
480359
Bacillota
TCC
Gly
>WENV181257783
OFFU01005058
418726
Bacillota
TGT
Thr
>WENV181257787
OFFU01005058
280642
Bacillota
TTG
Gln
>WENV181257788
OFFU01005058
280639
Bacillota
TTT
Lys
>WENV181257870
OFFU01008234
214241
Bacillota
GTC
Asp
>WENV181257662
OFFU01002972
348419
Bacillota
GTT
Asn
>WENV181257780
OFFU01005058
298270
Bacillota
TAC
Val
>WENV181257791
OFFU01005058
176018
Bacillota
CAT
Met
>WENV181257366
OFFU01000747
407852
Bacillota
TTC
Glu
>WENV181257136
OFFU01000216
179176
Bacillota
ACG
Arg
>WENV181257164
OFFU01000261
179176
Bacillota
ACG
Arg
>WENV181257838
OFFU01006667
179176
Bacillota
ACG
Arg
>WENV181257631
OFFU01002387
285947
Bacillota
CTG
Gln
>WENV181257928
OFFU01012398
283493
Bacillota
CTC
Glu
>WENV181257786
OFFU01005058
176014
Bacillota
TCT
Arg
>WENV181257022
OFFU01000099
82124
Bacillota
TAA
Leu
>WENV181257629
OFFU01002346
73664
Bacillota
CAG
Leu
>WENV181257220
OFFU01000356
20358
Bacillota
CGA
Ser
>WENV181257260
OFFU01000419
481217
Bacillota
GCA
Cys
>WENV181257775
OFFU01005058
280646
Bacillota
TGC
Ala
>WENV181257782
OFFU01005058
280641
Bacillota
GTT
Asn
>WENV181257553
OFFU01001423
21311
Bacillota
GCT
Ser
>WENV181256988
OFFU01000071
284627
Bacillota
GAA
Phe
>WENV181257237
OFFU01000388
282730
Bacillota
TAC
Val
>WENV181257369
OFFU01000747
301839
Bacillota
GTG
His
>WENV181257340
OFFU01000657
120213
Bacillota
GTA
Tyr
>WENV181258086
OFFU01032535
355816
Bacillota
TGC
Ala
>WENV181257665
OFFU01002972
175911
Bacillota
GTC
Asp
>WENV181257681
OFFU01003227
204381
Bacillota
GAT
Ile
>WENV181257683
OFFU01003227
204381
Bacillota
GAT
Ile
>WENV181258114
OFFU01040596
317482
Bacillota
TAC
Val
>WENV181257240
OFFU01000388
294385
Bacillota
TGT
Thr
>WENV181257825
OFFU01006071
58120
Bacillota
AAG
Leu
>WENV181257368
OFFU01000747
330582
Bacillota
GTC
Asp
>WENV181257396
OFFU01000819
105208
Bacillota
GTA
Tyr
>WENV181258034
OFFU01025784
294275
Bacillota
TGC
Ala
>WENV181257243
OFFU01000388
178962
Bacillota
ACG
Arg
>WENV181257024
OFFU01000099
280476
Bacillota
TTT
Lys
>WENV181258119
OFFU01042419
201856
Bacillota
GAT
Ile
>WENV181257936
OFFU01013137
329074
Bacillota
TGC
Ala
>WENV181257132
OFFU01000210
285601
Bacillota
TTC
Glu
>WENV181257133
OFFU01000210
285601
Bacillota
TTC
Glu
>WENV181257778
OFFU01005058
443965
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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