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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181282105
OFGP01002469
148379
Bacillota
CGG
Pro
>WENV181281477
OFGP01000025
267556
Bacillota
TAC
Val
>WENV181281667
OFGP01000290
267556
Bacillota
TAC
Val
>WENV181281868
OFGP01000909
267556
Bacillota
TAC
Val
>WENV181281539
OFGP01000090
16567
Bacillota
CGA
Ser
>WENV181281727
OFGP01000419
148239
Bacillota
TCT
Arg
>WENV181281856
OFGP01000883
148239
Bacillota
TCT
Arg
>WENV181282044
OFGP01001896
235154
Bacillota
GTT
Asn
>WENV181282627
OFGP01039196
16358
Bacillota
GCT
Ser
>WENV181282319
OFGP01007624
277175
Bacillota
CTT
Lys
>WENV181282313
OFGP01007374
277175
Bacillota
CTT
Lys
>WENV181282196
OFGP01003785
277175
Bacillota
CTT
Lys
>WENV181281495
OFGP01000044
277175
Bacillota
CTT
Lys
>WENV181281879
OFGP01000928
59312
Bacillota
CAG
Leu
>WENV181282385
OFGP01011635
235919
Bacillota
GTG
His
>WENV181282000
OFGP01001536
59655
Bacillota
CAG
Leu
>WENV181282220
OFGP01004040
356658
Bacillota
TTC
Glu
>WENV181282199
OFGP01003830
258685
Bacillota
CGT
Thr
>WENV181281638
OFGP01000225
149026
Bacillota
TCT
Arg
>WENV181282453
OFGP01016076
247786
Bacillota
CGT
Thr
>WENV181282624
OFGP01039196
238151
Bacillota
>WENV181281857
OFGP01000883
156937
Bacillota
GTG
His
>WENV181281728
OFGP01000419
156937
Bacillota
GTG
His
>WENV181281605
OFGP01000166
156937
Bacillota
GTG
His
>WENV181282387
OFGP01011635
411743
Bacillota
GCA
Cys
>WENV181282304
OFGP01007250
247747
Bacillota
GGT
Thr
>WENV181282129
OFGP01002918
274189
Bacillota
TGT
Thr
>WENV181282150
OFGP01002959
96360
Bacillota
GTA
Tyr
>WENV181281954
OFGP01001257
96360
Bacillota
GTA
Tyr
>WENV181282114
OFGP01002654
16266
Bacillota
GCT
Ser
>WENV181282235
OFGP01004446
235929
Bacillota
CTG
Gln
>WENV181282703
OFGP01064620
256115
Bacillota
CGT
Thr
>WENV181282308
OFGP01007324
413152
Bacillota
TCC
Gly
>WENV181281600
OFGP01000155
149024
Bacillota
GGT
Thr
>WENV181282695
OFGP01061346
237266
Bacillota
GTG
His
>WENV181282012
OFGP01001631
162445
Bacillota
CAT
Met
>WENV181281637
OFGP01000222
162445
Bacillota
CAT
Met
>WENV181281573
OFGP01000127
100326
Bacillota
GTA
Tyr
>WENV181282086
OFGP01002258
147684
Bacillota
ACG
Arg
>WENV181281700
OFGP01000349
147684
Bacillota
ACG
Arg
>WENV181281717
OFGP01000404
239812
Bacillota
CCT
Arg
>WENV181281587
OFGP01000145
18852
Bacillota
GCT
Ser
>WENV181282147
OFGP01002959
339391
Bacillota
TTC
Glu
>WENV181282693
OFGP01061346
85288
Bacillota
GTA
Tyr
>WENV181282640
OFGP01042044
241432
Bacillota
TGT
Thr
>WENV181282085
OFGP01002242
254433
Bacillota
TAC
Val
>WENV181282381
OFGP01011343
147276
Bacillota
CCT
Arg
>WENV181282165
OFGP01003035
157838
Bacillota
GTC
Asp
>WENV181282412
OFGP01013843
247734
Bacillota
TGC
Ala
>WENV181282563
OFGP01028849
419877
Bacillota
TCC
Gly
>WENV181281722
OFGP01000418
238974
Bacillota
GAA
Phe
>WENV181282231
OFGP01004313
248965
Bacillota
GCC
Gly
>WENV181282435
OFGP01014731
272488
Bacillota
GAA
Phe
>WENV181281652
OFGP01000243
272488
Bacillota
GAA
Phe
>WENV181282694
OFGP01061346
412118
Bacillota
>WENV181282698
OFGP01061346
45160
Bacillota
CAA
Leu
>WENV181281761
OFGP01000519
238945
Bacillota
GCC
Gly
>WENV181281519
OFGP01000061
238945
Bacillota
GCC
Gly
>WENV181282146
OFGP01002959
7065
Bacillota
GCT
Ser
>WENV181282632
OFGP01039959
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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