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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181303675
OFHP01071716
155958
Bacillota
GAT
Ile
>WENV181303416
OFHP01012364
237957
Bacillota
GTT
Asn
>WENV181303389
OFHP01010390
37213
Bacillota
TGA
Ser
>WENV181302756
OFHP01000025
267556
Bacillota
TAC
Val
>WENV181303652
OFHP01059351
339890
Bacillota
TTG
Gln
>WENV181303130
OFHP01001498
147487
Bacillota
ACG
Arg
>WENV181303136
OFHP01001498
238489
Bacillota
GTC
Asp
>WENV181303508
OFHP01021604
235154
Bacillota
GTT
Asn
>WENV181303147
OFHP01001587
59312
Bacillota
CAG
Leu
>WENV181303380
OFHP01009842
361897
Bacillota
CTC
Glu
>WENV181303527
OFHP01024870
16359
Bacillota
CGA
Ser
>WENV181303419
OFHP01012364
247786
Bacillota
CGT
Thr
>WENV181303633
OFHP01052062
268272
Bacillota
TGC
Ala
>WENV181303418
OFHP01012364
339151
Bacillota
TTC
Glu
>WENV181303151
OFHP01001775
156937
Bacillota
GTG
His
>WENV181303274
OFHP01004075
247747
Bacillota
GGT
Thr
>WENV181303220
OFHP01003003
413152
Bacillota
TCC
Gly
>WENV181303168
OFHP01002068
147684
Bacillota
ACG
Arg
>WENV181302928
OFHP01000381
18852
Bacillota
GCT
Ser
>WENV181303339
OFHP01006894
256380
Bacillota
>WENV181303653
OFHP01059351
235127
Bacillota
TTT
Lys
>WENV181303650
OFHP01059351
147674
Bacillota
TCT
Arg
>WENV181303362
OFHP01008448
147276
Bacillota
CCT
Arg
>WENV181303311
OFHP01005689
157838
Bacillota
GTC
Asp
>WENV181303573
OFHP01032507
238974
Bacillota
GAA
Phe
>WENV181303134
OFHP01001498
6950
Bacillota
TGA
Ser
>WENV181303400
OFHP01011347
247849
Bacillota
TGT
Thr
>WENV181303417
OFHP01012364
3271
Bacillota
GGA
Ser
>WENV181303033
OFHP01000864
272488
Bacillota
GAA
Phe
>WENV181303138
OFHP01001498
45160
Bacillota
CAA
Leu
>WENV181303132
OFHP01001498
174818
Bacillota
CAT
Met
>WENV181303055
OFHP01000986
238945
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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