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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181347944
OFMN01000004
398852
Bacillota
CTC
Glu
>WENV181347945
OFMN01000004
398852
Bacillota
CTC
Glu
>WENV181347946
OFMN01000004
398852
Bacillota
CTC
Glu
>WENV181347954
OFMN01000007
285756
Bacillota
GCC
Gly
>WENV181347976
OFMN01000010
510477
Bacillota
TCC
Gly
>WENV181348034
OFMN01000034
405393
Bacillota
GCC
Gly
>WENV181348046
OFMN01000042
332181
Bacillota
TGT
Thr
>WENV181348049
OFMN01000042
289123
Bacillota
GGT
Thr
>WENV181348059
OFMN01000048
280427
Bacillota
TAC
Val
>WENV181348061
OFMN01000048
280428
Bacillota
GAA
Phe
>WENV181348071
OFMN01000054
346451
Bacillota
TTT
Lys
>WENV181348096
OFMN01000074
186123
Bacillota
GTC
Asp
>WENV181348097
OFMN01000074
405393
Bacillota
GCC
Gly
>WENV181348098
OFMN01000074
291629
Bacillota
CCA
Trp
>WENV181348119
OFMN01000096
290325
Bacillota
GCC
Gly
>WENV181348150
OFMN01000127
290325
Bacillota
GCC
Gly
>WENV181348152
OFMN01000127
295166
Bacillota
TGC
Ala
>WENV181348153
OFMN01000127
236579
Bacillota
GAT
Ile
>WENV181348156
OFMN01000128
280428
Bacillota
GAA
Phe
>WENV181348157
OFMN01000128
290325
Bacillota
GCC
Gly
>WENV181348168
OFMN01000138
184497
Bacillota
GGG
Pro
>WENV181348209
OFMN01000187
175868
Bacillota
GTT
Asn
>WENV181348236
OFMN01000213
346451
Bacillota
TTT
Lys
>WENV181348241
OFMN01000216
179176
Bacillota
ACG
Arg
>WENV181348280
OFMN01000287
312274
Bacillota
GGC
Ala
>WENV181348286
OFMN01000299
184497
Bacillota
GGG
Pro
>WENV181348290
OFMN01000317
398852
Bacillota
CTC
Glu
>WENV181348298
OFMN01000327
73664
Bacillota
CAG
Leu
>WENV181348300
OFMN01000332
118669
Bacillota
GTA
Tyr
>WENV181348349
OFMN01000437
56074
Bacillota
TGA
Ser
>WENV181348350
OFMN01000437
5692
Bacillota
GCT
Ser
>WENV181348382
OFMN01000519
175842
Bacillota
CAC
Val
>WENV181348408
OFMN01000586
179755
Bacillota
CCG
Arg
>WENV181348417
OFMN01000616
280473
Bacillota
TGG
Pro
>WENV181348425
OFMN01000639
480322
Bacillota
CTG
Gln
>WENV181348444
OFMN01000688
291576
Bacillota
CCC
Gly
>WENV181348457
OFMN01000712
480322
Bacillota
CTG
Gln
>WENV181348466
OFMN01000727
175831
Bacillota
ACG
Arg
>WENV181348468
OFMN01000729
398857
Bacillota
TTC
Glu
>WENV181348480
OFMN01000786
179755
Bacillota
CCG
Arg
>WENV181348505
OFMN01000889
25955
Bacillota
GCT
Ser
>WENV181348507
OFMN01000900
481217
Bacillota
GCA
Cys
>WENV181348512
OFMN01000917
480324
Bacillota
TTG
Gln
>WENV181348525
OFMN01000988
175842
Bacillota
CAC
Val
>WENV181348541
OFMN01001059
291576
Bacillota
CCC
Gly
>WENV181348553
OFMN01001104
117745
Bacillota
GTA
Tyr
>WENV181348554
OFMN01001106
480324
Bacillota
TTG
Gln
>WENV181348573
OFMN01001218
175868
Bacillota
GTT
Asn
>WENV181348579
OFMN01001256
175859
Bacillota
TCT
Arg
>WENV181348581
OFMN01001268
291576
Bacillota
CCC
Gly
>WENV181348586
OFMN01001306
175842
Bacillota
CAC
Val
>WENV181348629
OFMN01001575
480322
Bacillota
CTG
Gln
>WENV181348643
OFMN01001639
284723
Bacillota
TAC
Val
>WENV181348648
OFMN01001702
480322
Bacillota
CTG
Gln
>WENV181348652
OFMN01001733
480324
Bacillota
TTG
Gln
>WENV181348662
OFMN01001793
280444
Bacillota
GGT
Thr
>WENV181348663
OFMN01001794
73009
Bacillota
CAG
Leu
>WENV181348666
OFMN01001820
175868
Bacillota
GTT
Asn
>WENV181348672
OFMN01001873
480324
Bacillota
TTG
Gln
>WENV181348680
OFMN01001911
73638
Bacillota
AAG
Leu
>WENV181348688
OFMN01002018
280447
Bacillota
GAC
Val
>WENV181348689
OFMN01002019
52748
Bacillota
TGA
Ser
>WENV181348694
OFMN01002062
480324
Bacillota
TTG
Gln
>WENV181348704
OFMN01002144
175831
Bacillota
ACG
Arg
>WENV181348707
OFMN01002164
215243
Bacillota
CAT
Met
>WENV181348714
OFMN01002215
175842
Bacillota
CAC
Val
>WENV181348745
OFMN01002603
280473
Bacillota
TGG
Pro
>WENV181348755
OFMN01002711
280444
Bacillota
GGT
Thr
>WENV181348783
OFMN01003131
73009
Bacillota
CAG
Leu
>WENV181348801
OFMN01003230
229015
Bacillota
GTG
His
>WENV181348810
OFMN01003364
179755
Bacillota
CCG
Arg
>WENV181348828
OFMN01003566
175868
Bacillota
GTT
Asn
>WENV181348832
OFMN01003676
179755
Bacillota
CCG
Arg
>WENV181348838
OFMN01003820
280473
Bacillota
TGG
Pro
>WENV181348840
OFMN01003883
175859
Bacillota
TCT
Arg
>WENV181348843
OFMN01003912
175849
Bacillota
GTC
Asp
>WENV181348844
OFMN01003912
280444
Bacillota
GGT
Thr
>WENV181348845
OFMN01003912
280444
Bacillota
GGT
Thr
>WENV181348854
OFMN01004161
56074
Bacillota
TGA
Ser
>WENV181348865
OFMN01004303
280447
Bacillota
GAC
Val
>WENV181348881
OFMN01004653
99852
Bacillota
GTA
Tyr
>WENV181348889
OFMN01004845
330413
Bacillota
CTT
Lys
>WENV181348897
OFMN01005061
497729
Bacillota
CCA
Trp
>WENV181348935
OFMN01005872
280492
Bacillota
CTT
Lys
>WENV181348943
OFMN01006271
480322
Bacillota
CTG
Gln
>WENV181348977
OFMN01007612
280447
Bacillota
GAC
Val
>WENV181348978
OFMN01007664
21311
Bacillota
GCT
Ser
>WENV181348982
OFMN01007988
56079
Bacillota
AAG
Leu
>WENV181348985
OFMN01007991
285556
Bacillota
TGT
Thr
>WENV181348991
OFMN01008165
280462
Bacillota
GAA
Phe
>WENV181349009
OFMN01008847
46835
Bacillota
TAA
Leu
>WENV181349028
OFMN01009369
175849
Bacillota
GTC
Asp
>WENV181349029
OFMN01009369
280444
Bacillota
GGT
Thr
>WENV181349038
OFMN01009600
280447
Bacillota
GAC
Val
>WENV181349048
OFMN01010137
491377
Bacillota
GCA
Cys
>WENV181349049
OFMN01010147
27216
Bacillota
GCT
Ser
>WENV181349051
OFMN01010445
398852
Bacillota
CTC
Glu
>WENV181349055
OFMN01010761
290391
Bacillota
TAC
Val
>WENV181349068
OFMN01011383
73664
Bacillota
CAG
Leu
>WENV181349071
OFMN01011628
480322
Bacillota
CTG
Gln
>WENV181349072
OFMN01011628
291581
Bacillota
CGG
Pro
>WENV181349073
OFMN01011711
353153
Bacillota
TGC
Ala
>WENV181349092
OFMN01013112
201856
Bacillota
GAT
Ile
>WENV181349096
OFMN01013839
221826
Bacillota
ACG
Arg
>WENV181349105
OFMN01014508
280473
Bacillota
TGG
Pro
>WENV181349128
OFMN01017064
179755
Bacillota
CCG
Arg
>WENV181349133
OFMN01017218
398833
Bacillota
TGT
Thr
>WENV181349180
OFMN01021098
294275
Bacillota
TGC
Ala
>WENV181349190
OFMN01023109
175859
Bacillota
TCT
Arg
>WENV181349194
OFMN01023240
398854
Bacillota
CTC
Glu
>WENV181349211
OFMN01024925
280463
Bacillota
TTT
Lys
>WENV181349214
OFMN01025093
398835
Bacillota
GCC
Gly
>WENV181349232
OFMN01027768
280428
Bacillota
GAA
Phe
>WENV181349233
OFMN01027826
400963
Bacillota
GTT
Asn
>WENV181349293
OFMN01039254
416763
Bacillota
CTC
Glu
>WENV181349337
OFMN01054251
292374
Bacillota
TGC
Ala
>WENV181349370
OFMN01069223
46655
Bacillota
TGA
Ser
>WENV181349373
OFMN01069942
352588
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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