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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181404141
OGBZ01001621
445832
Bacillota
GCC
Gly
>WENV181404145
OGBZ01001628
283209
Bacillota
GAA
Phe
>WENV181404170
OGBZ01002333
158633
Bacillota
TGG
Pro
>WENV181404179
OGBZ01002740
48505
Bacillota
TGA
Ser
>WENV181404210
OGBZ01004102
20851
Bacillota
CGA
Ser
>WENV181404217
OGBZ01004434
288760
Bacillota
GGT
Thr
>WENV181404223
OGBZ01005107
48505
Bacillota
TGA
Ser
>WENV181404256
OGBZ01007350
288762
Bacillota
GGG
Pro
>WENV181404275
OGBZ01009684
403606
Bacillota
GTT
Asn
>WENV181404277
OGBZ01009760
288756
Bacillota
CAT
Met
>WENV181404279
OGBZ01009760
306963
Bacillota
GAA
Phe
>WENV181404280
OGBZ01009760
403607
Bacillota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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