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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181473053
OGFB01000014
99852
Bacillota
GTA
Tyr
>WENV181473310
OGFB01000976
343590
Bacillota
GCC
Gly
>WENV181473113
OGFB01000097
349107
Bacillota
GCC
Gly
>WENV181473117
OGFB01000097
349107
Bacillota
GCC
Gly
>WENV181473052
OGFB01000014
405363
Bacillota
GCA
Cys
>WENV181473116
OGFB01000097
280428
Bacillota
GAA
Phe
>WENV181473358
OGFB01001695
356660
Bacillota
CTT
Lys
>WENV181473440
OGFB01005274
56397
Bacillota
CAA
Leu
>WENV181473226
OGFB01000338
141454
Bacillota
TAG
Leu
>WENV181473114
OGFB01000097
280466
Bacillota
TAC
Val
>WENV181473246
OGFB01000415
284746
Bacillota
CTG
Gln
>WENV181473058
OGFB01000019
280492
Bacillota
CTT
Lys
>WENV181473227
OGFB01000338
280492
Bacillota
CTT
Lys
>WENV181473108
OGFB01000090
175842
Bacillota
CAC
Val
>WENV181473465
OGFB01006397
184497
Bacillota
GGG
Pro
>WENV181473224
OGFB01000338
459011
Bacillota
TGT
Thr
>WENV181473365
OGFB01002013
179176
Bacillota
ACG
Arg
>WENV181473399
OGFB01003078
285947
Bacillota
CTG
Gln
>WENV181473069
OGFB01000029
190476
Bacillota
CAT
Met
>WENV181473063
OGFB01000022
73664
Bacillota
CAG
Leu
>WENV181473094
OGFB01000053
280447
Bacillota
GAC
Val
>WENV181473398
OGFB01003039
280447
Bacillota
GAC
Val
>WENV181473072
OGFB01000030
5692
Bacillota
GCT
Ser
>WENV181473492
OGFB01010642
312274
Bacillota
GGC
Ala
>WENV181473319
OGFB01001069
359682
Bacillota
TAC
Val
>WENV181473051
OGFB01000014
73009
Bacillota
CAG
Leu
>WENV181473190
OGFB01000257
73009
Bacillota
CAG
Leu
>WENV181473528
OGFB01016367
280646
Bacillota
TGC
Ala
>WENV181473193
OGFB01000257
291581
Bacillota
CGG
Pro
>WENV181473165
OGFB01000202
175859
Bacillota
TCT
Arg
>WENV181473223
OGFB01000338
280641
Bacillota
GTT
Asn
>WENV181473068
OGFB01000029
175831
Bacillota
ACG
Arg
>WENV181473230
OGFB01000353
284627
Bacillota
GAA
Phe
>WENV181473438
OGFB01005274
282730
Bacillota
TAC
Val
>WENV181473439
OGFB01005274
282731
Bacillota
GTG
His
>WENV181473335
OGFB01001247
27216
Bacillota
GCT
Ser
>WENV181473131
OGFB01000117
480322
Bacillota
CTG
Gln
>WENV181473192
OGFB01000257
480322
Bacillota
CTG
Gln
>WENV181473127
OGFB01000108
175868
Bacillota
GTT
Asn
>WENV181473199
OGFB01000267
175868
Bacillota
GTT
Asn
>WENV181473198
OGFB01000267
398854
Bacillota
CTC
Glu
>WENV181473232
OGFB01000356
291576
Bacillota
CCC
Gly
>WENV181473453
OGFB01005691
497729
Bacillota
CCA
Trp
>WENV181473464
OGFB01006347
355816
Bacillota
TGC
Ala
>WENV181473061
OGFB01000022
56079
Bacillota
AAG
Leu
>WENV181473062
OGFB01000022
56079
Bacillota
AAG
Leu
>WENV181473540
OGFB01017719
323864
Bacillota
TGC
Ala
>WENV181473401
OGFB01003106
179243
Bacillota
CGG
Pro
>WENV181473569
OGFB01025882
292374
Bacillota
TGC
Ala
>WENV181473038
OGFB01000013
179935
Bacillota
GTC
Asp
>WENV181473313
OGFB01001057
398857
Bacillota
TTC
Glu
>WENV181473090
OGFB01000050
117745
Bacillota
GTA
Tyr
>WENV181473239
OGFB01000382
117745
Bacillota
GTA
Tyr
>WENV181473181
OGFB01000232
280444
Bacillota
GGT
Thr
>WENV181473185
OGFB01000232
280444
Bacillota
GGT
Thr
>WENV181473152
OGFB01000152
46643
Bacillota
TGA
Ser
>WENV181473067
OGFB01000029
179755
Bacillota
CCG
Arg
>WENV181473045
OGFB01000013
401111
Bacillota
TTC
Glu
>WENV181473039
OGFB01000013
284742
Bacillota
GAA
Phe
>WENV181473070
OGFB01000029
398832
Bacillota
TTC
Glu
>WENV181473135
OGFB01000127
280462
Bacillota
GAA
Phe
>WENV181473241
OGFB01000382
280462
Bacillota
GAA
Phe
>WENV181473085
OGFB01000041
398852
Bacillota
CTC
Glu
>WENV181473089
OGFB01000049
398852
Bacillota
CTC
Glu
>WENV181473091
OGFB01000050
398852
Bacillota
CTC
Glu
>WENV181473373
OGFB01002221
369718
Bacillota
CTC
Glu
>WENV181473215
OGFB01000318
175857
Bacillota
GTG
His
>WENV181473387
OGFB01002786
285756
Bacillota
GCC
Gly
>WENV181473147
OGFB01000139
398833
Bacillota
TGT
Thr
>WENV181473115
OGFB01000097
175849
Bacillota
GTC
Asp
>WENV181473184
OGFB01000232
175849
Bacillota
GTC
Asp
>WENV181473217
OGFB01000318
280463
Bacillota
TTT
Lys
>WENV181473242
OGFB01000382
280463
Bacillota
TTT
Lys
>WENV181473071
OGFB01000030
56074
Bacillota
TGA
Ser
>WENV181473095
OGFB01000053
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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