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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181478705
OGFG01000048
24650
Bacillota
TAA
Leu
>WENV181479972
OGFG01014766
155958
Bacillota
GAT
Ile
>WENV181479087
OGFG01000678
309417
Bacillota
GGC
Ala
>WENV181479763
OGFG01006653
309417
Bacillota
GGC
Ala
>WENV181479794
OGFG01007640
309417
Bacillota
GGC
Ala
>WENV181479918
OGFG01012120
309417
Bacillota
GGC
Ala
>WENV181478783
OGFG01000120
156958
Bacillota
GAT
Ile
>WENV181479273
OGFG01001411
155113
Bacillota
CGG
Pro
>WENV181479463
OGFG01002838
144612
Bacillota
TCT
Arg
>WENV181479949
OGFG01013469
154063
Bacillota
CGG
Pro
>WENV181479849
OGFG01009364
390329
Bacillota
TTC
Glu
>WENV181478882
OGFG01000273
267649
Bacillota
TAC
Val
>WENV181479245
OGFG01001291
339890
Bacillota
TTG
Gln
>WENV181479747
OGFG01006379
235098
Bacillota
GAC
Val
>WENV181479433
OGFG01002545
235098
Bacillota
GAC
Val
>WENV181479350
OGFG01001990
235098
Bacillota
GAC
Val
>WENV181479479
OGFG01002967
338152
Bacillota
TTC
Glu
>WENV181480457
OGFG01085666
144577
Bacillota
GAT
Ile
>WENV181479981
OGFG01015251
304022
Bacillota
GCC
Gly
>WENV181479869
OGFG01010310
429443
Bacillota
GCA
Cys
>WENV181479035
OGFG01000564
347827
Bacillota
TTC
Glu
>WENV181480005
OGFG01016938
307003
Bacillota
TGC
Ala
>WENV181479134
OGFG01000856
59312
Bacillota
CAG
Leu
>WENV181479010
OGFG01000510
59312
Bacillota
CAG
Leu
>WENV181478787
OGFG01000121
59312
Bacillota
CAG
Leu
>WENV181480093
OGFG01023139
238910
Bacillota
CTT
Lys
>WENV181479090
OGFG01000687
338147
Bacillota
CTC
Glu
>WENV181479054
OGFG01000625
338147
Bacillota
CTC
Glu
>WENV181478801
OGFG01000139
338147
Bacillota
CTC
Glu
>WENV181478700
OGFG01000040
338147
Bacillota
CTC
Glu
>WENV181479855
OGFG01009560
391536
Bacillota
TTC
Glu
>WENV181479976
OGFG01015061
293599
Bacillota
CTT
Lys
>WENV181479121
OGFG01000810
429429
Bacillota
CCA
Trp
>WENV181480009
OGFG01017098
313454
Bacillota
GAA
Phe
>WENV181478786
OGFG01000121
44859
Bacillota
AAG
Leu
>WENV181480197
OGFG01034737
16834
Bacillota
GCT
Ser
>WENV181479846
OGFG01009262
11034
Bacillota
GGA
Ser
>WENV181479384
OGFG01002186
11034
Bacillota
GGA
Ser
>WENV181480096
OGFG01023325
114002
Bacillota
CAA
Leu
>WENV181480083
OGFG01022049
235079
Bacillota
GAA
Phe
>WENV181480328
OGFG01053237
340265
Bacillota
GCC
Gly
>WENV181480034
OGFG01018596
235087
Bacillota
TGC
Ala
>WENV181479856
OGFG01009560
243612
Bacillota
TAC
Val
>WENV181479769
OGFG01006962
245298
Bacillota
CGG
Pro
>WENV181479709
OGFG01005750
245298
Bacillota
CGG
Pro
>WENV181478740
OGFG01000076
155089
Bacillota
CAT
Met
>WENV181479492
OGFG01003083
413152
Bacillota
TCC
Gly
>WENV181479934
OGFG01012500
152149
Bacillota
GTG
His
>WENV181480343
OGFG01055859
201704
Bacillota
GAT
Ile
>WENV181480466
OGFG01091761
152492
Bacillota
GGG
Pro
>WENV181480107
OGFG01025069
147135
Bacillota
ACG
Arg
>WENV181479088
OGFG01000682
100326
Bacillota
GTA
Tyr
>WENV181478990
OGFG01000478
144610
Bacillota
GTG
His
>WENV181479270
OGFG01001392
240017
Bacillota
GCC
Gly
>WENV181479943
OGFG01013029
411547
Bacillota
CTG
Gln
>WENV181479892
OGFG01011248
411547
Bacillota
CTG
Gln
>WENV181479768
OGFG01006962
411547
Bacillota
CTG
Gln
>WENV181479708
OGFG01005750
411547
Bacillota
CTG
Gln
>WENV181479643
OGFG01004502
411547
Bacillota
CTG
Gln
>WENV181479316
OGFG01001642
411547
Bacillota
CTG
Gln
>WENV181480053
OGFG01020045
147684
Bacillota
ACG
Arg
>WENV181479102
OGFG01000730
263765
Bacillota
TAC
Val
>WENV181478995
OGFG01000479
263765
Bacillota
TAC
Val
>WENV181480362
OGFG01059366
342895
Bacillota
CAT
Met
>WENV181480473
OGFG01093119
109476
Bacillota
TAG
Leu
>WENV181479127
OGFG01000824
18852
Bacillota
GCT
Ser
>WENV181479672
OGFG01004937
235095
Bacillota
GGT
Thr
>WENV181479610
OGFG01004265
235095
Bacillota
GGT
Thr
>WENV181479481
OGFG01002977
235095
Bacillota
GGT
Thr
>WENV181480262
OGFG01041918
304759
Bacillota
TAC
Val
>WENV181479986
OGFG01015868
411549
Bacillota
TTG
Gln
>WENV181479912
OGFG01011892
411549
Bacillota
TTG
Gln
>WENV181479692
OGFG01005358
411549
Bacillota
TTG
Gln
>WENV181479268
OGFG01001388
411549
Bacillota
TTG
Gln
>WENV181478866
OGFG01000235
235142
Bacillota
CTT
Lys
>WENV181478862
OGFG01000230
235142
Bacillota
CTT
Lys
>WENV181479084
OGFG01000660
245386
Bacillota
CCA
Trp
>WENV181480069
OGFG01021253
148188
Bacillota
CCG
Arg
>WENV181479936
OGFG01012695
148188
Bacillota
CCG
Arg
>WENV181479661
OGFG01004782
148188
Bacillota
CCG
Arg
>WENV181479719
OGFG01005927
80612
Bacillota
GTA
Tyr
>WENV181479980
OGFG01015240
256380
Bacillota
>WENV181478972
OGFG01000453
256380
Bacillota
>WENV181480443
OGFG01080811
235197
Bacillota
GTC
Asp
>WENV181480295
OGFG01046757
368876
Bacillota
GCC
Gly
>WENV181479401
OGFG01002283
235124
Bacillota
TGG
Pro
>WENV181479558
OGFG01003616
338129
Bacillota
TGT
Thr
>WENV181479259
OGFG01001339
118077
Bacillota
>WENV181479148
OGFG01000903
157838
Bacillota
GTC
Asp
>WENV181479046
OGFG01000597
157838
Bacillota
GTC
Asp
>WENV181480195
OGFG01034323
243613
Bacillota
GTG
His
>WENV181479459
OGFG01002828
144652
Bacillota
GTC
Asp
>WENV181480322
OGFG01052795
247734
Bacillota
TGC
Ala
>WENV181479105
OGFG01000732
238974
Bacillota
GAA
Phe
>WENV181479791
OGFG01007531
144621
Bacillota
GTT
Asn
>WENV181479394
OGFG01002253
144621
Bacillota
GTT
Asn
>WENV181478770
OGFG01000108
235113
Bacillota
GAA
Phe
>WENV181480201
OGFG01034938
243098
Bacillota
GGT
Thr
>WENV181479380
OGFG01002139
58712
Bacillota
CAG
Leu
>WENV181479359
OGFG01002050
58712
Bacillota
CAG
Leu
>WENV181480254
OGFG01041446
21693
Bacillota
GCT
Ser
>WENV181479260
OGFG01001339
144762
Bacillota
TCT
Arg
>WENV181479822
OGFG01008702
245296
Bacillota
CCC
Gly
>WENV181479587
OGFG01003940
245296
Bacillota
CCC
Gly
>WENV181479979
OGFG01015158
272992
Bacillota
CTT
Lys
>WENV181479324
OGFG01001728
272992
Bacillota
CTT
Lys
>WENV181479554
OGFG01003573
144594
Bacillota
CAC
Val
>WENV181479089
OGFG01000687
95563
Bacillota
GTA
Tyr
>WENV181479123
OGFG01000819
414486
Bacillota
CCC
Gly
>WENV181479533
OGFG01003427
272488
Bacillota
GAA
Phe
>WENV181479248
OGFG01001293
114075
Bacillota
TAG
Leu
>WENV181480460
OGFG01086830
292012
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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