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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181547604
OGIJ01000029
235171
Bacillota
CCA
Trp
>WENV181547605
OGIJ01000029
196621
Bacillota
GTC
Asp
>WENV181547606
OGIJ01000029
235095
Bacillota
GGT
Thr
>WENV181547620
OGIJ01000040
44854
Bacillota
TGA
Ser
>WENV181547621
OGIJ01000040
4624
Bacillota
GCT
Ser
>WENV181547632
OGIJ01000059
245296
Bacillota
CCC
Gly
>WENV181547651
OGIJ01000086
411549
Bacillota
TTG
Gln
>WENV181547654
OGIJ01000102
342895
Bacillota
CAT
Met
>WENV181547655
OGIJ01000112
144583
Bacillota
ACG
Arg
>WENV181547658
OGIJ01000117
411547
Bacillota
CTG
Gln
>WENV181547659
OGIJ01000117
245298
Bacillota
CGG
Pro
>WENV181547665
OGIJ01000125
11034
Bacillota
GGA
Ser
>WENV181547667
OGIJ01000128
44854
Bacillota
TGA
Ser
>WENV181547668
OGIJ01000128
4624
Bacillota
GCT
Ser
>WENV181547669
OGIJ01000130
144621
Bacillota
GTT
Asn
>WENV181547673
OGIJ01000143
411547
Bacillota
CTG
Gln
>WENV181547675
OGIJ01000146
256380
Bacillota
>WENV181547676
OGIJ01000149
238974
Bacillota
GAA
Phe
>WENV181547679
OGIJ01000159
235124
Bacillota
TGG
Pro
>WENV181547681
OGIJ01000162
144612
Bacillota
TCT
Arg
>WENV181547690
OGIJ01000183
58712
Bacillota
CAG
Leu
>WENV181547691
OGIJ01000187
338129
Bacillota
TGT
Thr
>WENV181547699
OGIJ01000207
148188
Bacillota
CCG
Arg
>WENV181547704
OGIJ01000218
144612
Bacillota
TCT
Arg
>WENV181547706
OGIJ01000219
100326
Bacillota
GTA
Tyr
>WENV181547734
OGIJ01000272
114075
Bacillota
TAG
Leu
>WENV181547739
OGIJ01000289
338128
Bacillota
TTC
Glu
>WENV181547740
OGIJ01000292
411547
Bacillota
CTG
Gln
>WENV181547764
OGIJ01000346
235098
Bacillota
GAC
Val
>WENV181547767
OGIJ01000361
235095
Bacillota
GGT
Thr
>WENV181547769
OGIJ01000369
338149
Bacillota
CTC
Glu
>WENV181547770
OGIJ01000369
272992
Bacillota
CTT
Lys
>WENV181547798
OGIJ01000514
16842
Bacillota
CGA
Ser
>WENV181547799
OGIJ01000516
287034
Bacillota
GTT
Asn
>WENV181547801
OGIJ01000516
243612
Bacillota
TAC
Val
>WENV181547802
OGIJ01000516
273029
Bacillota
TGT
Thr
>WENV181547805
OGIJ01000516
281472
Bacillota
GGT
Thr
>WENV181547806
OGIJ01000516
152491
Bacillota
CAT
Met
>WENV181547813
OGIJ01000545
144594
Bacillota
CAC
Val
>WENV181547814
OGIJ01000550
338129
Bacillota
TGT
Thr
>WENV181547819
OGIJ01000594
272488
Bacillota
GAA
Phe
>WENV181547825
OGIJ01000617
144583
Bacillota
ACG
Arg
>WENV181547832
OGIJ01000749
245296
Bacillota
CCC
Gly
>WENV181547840
OGIJ01000769
338128
Bacillota
TTC
Glu
>WENV181547842
OGIJ01000780
411549
Bacillota
TTG
Gln
>WENV181547843
OGIJ01000780
411547
Bacillota
CTG
Gln
>WENV181547844
OGIJ01000780
245298
Bacillota
CGG
Pro
>WENV181547854
OGIJ01000860
235197
Bacillota
GTC
Asp
>WENV181547856
OGIJ01000860
368876
Bacillota
GCC
Gly
>WENV181547858
OGIJ01000860
37437
Bacillota
TAA
Leu
>WENV181547863
OGIJ01000956
194150
Bacillota
TGG
Pro
>WENV181547865
OGIJ01000956
178024
Bacillota
TCT
Arg
>WENV181547892
OGIJ01001226
148239
Bacillota
TCT
Arg
>WENV181547893
OGIJ01001226
144610
Bacillota
GTG
His
>WENV181547915
OGIJ01001302
235095
Bacillota
GGT
Thr
>WENV181547922
OGIJ01001338
413657
Bacillota
CCC
Gly
>WENV181547932
OGIJ01001488
429443
Bacillota
GCA
Cys
>WENV181547939
OGIJ01001660
11034
Bacillota
GGA
Ser
>WENV181547948
OGIJ01001780
58712
Bacillota
CAG
Leu
>WENV181547951
OGIJ01001921
114002
Bacillota
CAA
Leu
>WENV181547957
OGIJ01002022
16834
Bacillota
GCT
Ser
>WENV181547976
OGIJ01002638
144594
Bacillota
CAC
Val
>WENV181547983
OGIJ01003037
41154
Bacillota
TAA
Leu
>WENV181547985
OGIJ01003113
80612
Bacillota
GTA
Tyr
>WENV181547987
OGIJ01003214
37437
Bacillota
TAA
Leu
>WENV181548001
OGIJ01004064
148188
Bacillota
CCG
Arg
>WENV181548020
OGIJ01005120
147135
Bacillota
ACG
Arg
>WENV181548026
OGIJ01005455
114002
Bacillota
CAA
Leu
>WENV181548027
OGIJ01005622
18852
Bacillota
GCT
Ser
>WENV181548047
OGIJ01007760
243613
Bacillota
GTG
His
>WENV181548048
OGIJ01007760
343027
Bacillota
TTG
Gln
>WENV181548049
OGIJ01007760
243647
Bacillota
TTT
Lys
>WENV181548059
OGIJ01009214
429429
Bacillota
CCA
Trp
>WENV181548065
OGIJ01009804
235124
Bacillota
TGG
Pro
>WENV181548069
OGIJ01010282
256380
Bacillota
>WENV181548089
OGIJ01015896
114359
Bacillota
TAG
Leu
>WENV181548105
OGIJ01021272
414486
Bacillota
CCC
Gly
>WENV181548107
OGIJ01021983
155089
Bacillota
CAT
Met
>WENV181548121
OGIJ01028330
274026
Bacillota
TTT
Lys
>WENV181548144
OGIJ01046067
262575
Bacillota
TGC
Ala
>WENV181548183
OGIJ01079000
250349
Bacillota
GAA
Phe
>WENV181548190
OGIJ01090686
16285
Bacillota
GCT
Ser
>WENV181548200
OGIJ01111356
147684
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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