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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181554503
OGIS01000214
99852
Bacillota
GTA
Tyr
>WENV181554829
OGIS01009719
99852
Bacillota
GTA
Tyr
>WENV181554816
OGIS01008285
280500
Bacillota
TGC
Ala
>WENV181554698
OGIS01002267
405363
Bacillota
GCA
Cys
>WENV181555034
OGIS01049092
281077
Bacillota
GTT
Asn
>WENV181554717
OGIS01002819
175842
Bacillota
CAC
Val
>WENV181554802
OGIS01006908
175842
Bacillota
CAC
Val
>WENV181554898
OGIS01016257
179563
Bacillota
GAT
Ile
>WENV181554897
OGIS01016257
295166
Bacillota
TGC
Ala
>WENV181554626
OGIS01001307
280447
Bacillota
GAC
Val
>WENV181554632
OGIS01001425
280447
Bacillota
GAC
Val
>WENV181554782
OGIS01005018
280447
Bacillota
GAC
Val
>WENV181554519
OGIS01000292
5692
Bacillota
GCT
Ser
>WENV181554657
OGIS01001728
5692
Bacillota
GCT
Ser
>WENV181554758
OGIS01004142
312274
Bacillota
GGC
Ala
>WENV181554760
OGIS01004245
186123
Bacillota
GTC
Asp
>WENV181554504
OGIS01000214
73009
Bacillota
CAG
Leu
>WENV181554583
OGIS01000788
73009
Bacillota
CAG
Leu
>WENV181554643
OGIS01001598
73009
Bacillota
CAG
Leu
>WENV181554783
OGIS01005170
73009
Bacillota
CAG
Leu
>WENV181554972
OGIS01030754
291581
Bacillota
CGG
Pro
>WENV181554653
OGIS01001702
175859
Bacillota
TCT
Arg
>WENV181554847
OGIS01010657
175859
Bacillota
TCT
Arg
>WENV181554930
OGIS01021225
175831
Bacillota
ACG
Arg
>WENV181554674
OGIS01002015
179810
Bacillota
TCT
Arg
>WENV181554761
OGIS01004245
291634
Bacillota
GAA
Phe
>WENV181554887
OGIS01014255
294020
Bacillota
TAC
Val
>WENV181555033
OGIS01049092
293309
Bacillota
GTT
Asn
>WENV181555031
OGIS01047974
484885
Bacillota
TCC
Gly
>WENV181554736
OGIS01003580
480322
Bacillota
CTG
Gln
>WENV181554824
OGIS01009105
480322
Bacillota
CTG
Gln
>WENV181554565
OGIS01000637
175868
Bacillota
GTT
Asn
>WENV181554670
OGIS01001974
175868
Bacillota
GTT
Asn
>WENV181554711
OGIS01002655
175868
Bacillota
GTT
Asn
>WENV181554806
OGIS01007206
175868
Bacillota
GTT
Asn
>WENV181554863
OGIS01011813
314834
Bacillota
TGC
Ala
>WENV181554982
OGIS01031117
322848
Bacillota
CTT
Lys
>WENV181554669
OGIS01001974
398854
Bacillota
CTC
Glu
>WENV181554710
OGIS01002655
398854
Bacillota
CTC
Glu
>WENV181554541
OGIS01000472
291576
Bacillota
CCC
Gly
>WENV181554663
OGIS01001792
291576
Bacillota
CCC
Gly
>WENV181554708
OGIS01002621
291576
Bacillota
CCC
Gly
>WENV181554958
OGIS01026985
287280
Bacillota
TGT
Thr
>WENV181554650
OGIS01001665
480324
Bacillota
TTG
Gln
>WENV181554957
OGIS01026985
398857
Bacillota
TTC
Glu
>WENV181554686
OGIS01002132
280444
Bacillota
GGT
Thr
>WENV181554689
OGIS01002132
280444
Bacillota
GGT
Thr
>WENV181554732
OGIS01003507
280444
Bacillota
GGT
Thr
>WENV181554944
OGIS01024194
321753
Bacillota
GCC
Gly
>WENV181554572
OGIS01000673
179755
Bacillota
CCG
Arg
>WENV181554573
OGIS01000680
179755
Bacillota
CCG
Arg
>WENV181554977
OGIS01030944
401111
Bacillota
TTC
Glu
>WENV181555010
OGIS01036509
46835
Bacillota
TAA
Leu
>WENV181554794
OGIS01006188
398832
Bacillota
TTC
Glu
>WENV181554658
OGIS01001729
118669
Bacillota
GTA
Tyr
>WENV181554768
OGIS01004420
398852
Bacillota
CTC
Glu
>WENV181554675
OGIS01002015
175857
Bacillota
GTG
His
>WENV181554707
OGIS01002611
398833
Bacillota
TGT
Thr
>WENV181554688
OGIS01002132
175849
Bacillota
GTC
Asp
>WENV181554964
OGIS01027911
280486
Bacillota
TGC
Ala
>WENV181554762
OGIS01004245
405393
Bacillota
GCC
Gly
>WENV181554656
OGIS01001728
56074
Bacillota
TGA
Ser
>WENV181554716
OGIS01002807
280473
Bacillota
TGG
Pro
>WENV181554797
OGIS01006372
280473
Bacillota
TGG
Pro
>WENV181554894
OGIS01015533
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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