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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181611261
OGLR01003161
144612
Bacillota
TCT
Arg
>WENV181610995
OGLR01000109
267649
Bacillota
TAC
Val
>WENV181611294
OGLR01004318
235098
Bacillota
GAC
Val
>WENV181611543
OGLR01024991
338152
Bacillota
TTC
Glu
>WENV181611287
OGLR01004024
340263
Bacillota
TTC
Glu
>WENV181611196
OGLR01001828
148239
Bacillota
TCT
Arg
>WENV181611384
OGLR01007644
44854
Bacillota
TGA
Ser
>WENV181611258
OGLR01003148
44854
Bacillota
TGA
Ser
>WENV181611289
OGLR01004024
148348
Bacillota
GTC
Asp
>WENV181611340
OGLR01005706
307003
Bacillota
TGC
Ala
>WENV181611266
OGLR01003335
59312
Bacillota
CAG
Leu
>WENV181611174
OGLR01001480
239080
Bacillota
CTG
Gln
>WENV181611310
OGLR01004677
338147
Bacillota
CTC
Glu
>WENV181611212
OGLR01002174
293599
Bacillota
CTT
Lys
>WENV181611576
OGLR01033817
151717
Bacillota
CAT
Met
>WENV181610929
OGLR01000010
429429
Bacillota
CCA
Trp
>WENV181611211
OGLR01002151
11034
Bacillota
GGA
Ser
>WENV181611493
OGLR01017558
340265
Bacillota
GCC
Gly
>WENV181611541
OGLR01024955
173314
Bacillota
GAT
Ile
>WENV181611339
OGLR01005695
199366
Bacillota
CAT
Met
>WENV181611355
OGLR01006385
338149
Bacillota
CTC
Glu
>WENV181611169
OGLR01001465
245298
Bacillota
CGG
Pro
>WENV181611110
OGLR01000639
37269
Bacillota
TGA
Ser
>WENV181611542
OGLR01024991
287000
Bacillota
GTT
Asn
>WENV181611475
OGLR01015052
235078
Bacillota
TAC
Val
>WENV181611247
OGLR01002908
100326
Bacillota
GTA
Tyr
>WENV181611197
OGLR01001828
144610
Bacillota
GTG
His
>WENV181611429
OGLR01010530
240017
Bacillota
GCC
Gly
>WENV181611168
OGLR01001465
411547
Bacillota
CTG
Gln
>WENV181611385
OGLR01007644
4624
Bacillota
GCT
Ser
>WENV181611259
OGLR01003148
4624
Bacillota
GCT
Ser
>WENV181611140
OGLR01001020
419639
Bacillota
GCA
Cys
>WENV181611288
OGLR01004024
239079
Bacillota
TAC
Val
>WENV181611389
OGLR01008205
411549
Bacillota
TTG
Gln
>WENV181611202
OGLR01001936
411549
Bacillota
TTG
Gln
>WENV181611479
OGLR01015462
80612
Bacillota
GTA
Tyr
>WENV181611129
OGLR01000872
256380
Bacillota
>WENV181611199
OGLR01001844
235124
Bacillota
TGG
Pro
>WENV181611194
OGLR01001825
338129
Bacillota
TGT
Thr
>WENV181611350
OGLR01006329
247734
Bacillota
TGC
Ala
>WENV181611382
OGLR01007560
235171
Bacillota
CCA
Trp
>WENV181611453
OGLR01012625
238974
Bacillota
GAA
Phe
>WENV181611356
OGLR01006385
144621
Bacillota
GTT
Asn
>WENV181611455
OGLR01012702
243098
Bacillota
GGT
Thr
>WENV181611134
OGLR01000896
58712
Bacillota
CAG
Leu
>WENV181611504
OGLR01019016
245296
Bacillota
CCC
Gly
>WENV181611286
OGLR01004024
239078
Bacillota
TTT
Lys
>WENV181611299
OGLR01004495
344240
Bacillota
GCC
Gly
>WENV181611312
OGLR01004872
196632
Bacillota
GTC
Asp
>WENV181611540
OGLR01024955
299139
Bacillota
TGC
Ala
>WENV181611328
OGLR01005438
144594
Bacillota
CAC
Val
>WENV181611229
OGLR01002419
338128
Bacillota
TTC
Glu
>WENV181611313
OGLR01004872
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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