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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181726251
OGPZ01000295
24650
Bacillota
TAA
Leu
>WENV181726720
OGPZ01004185
24650
Bacillota
TAA
Leu
>WENV181727248
OGPZ01050691
235134
Bacillota
GAA
Phe
>WENV181726032
OGPZ01000006
267556
Bacillota
TAC
Val
>WENV181726253
OGPZ01000306
267556
Bacillota
TAC
Val
>WENV181726292
OGPZ01000366
267556
Bacillota
TAC
Val
>WENV181726398
OGPZ01000759
267556
Bacillota
TAC
Val
>WENV181726731
OGPZ01004497
235098
Bacillota
GAC
Val
>WENV181726590
OGPZ01002321
338152
Bacillota
TTC
Glu
>WENV181727021
OGPZ01015833
44854
Bacillota
TGA
Ser
>WENV181726270
OGPZ01000332
59312
Bacillota
CAG
Leu
>WENV181726113
OGPZ01000048
59312
Bacillota
CAG
Leu
>WENV181727241
OGPZ01048448
238910
Bacillota
CTT
Lys
>WENV181726478
OGPZ01001210
338147
Bacillota
CTC
Glu
>WENV181726114
OGPZ01000050
338147
Bacillota
CTC
Glu
>WENV181726103
OGPZ01000040
338147
Bacillota
CTC
Glu
>WENV181727218
OGPZ01041800
235150
Bacillota
TGC
Ala
>WENV181726318
OGPZ01000410
235114
Bacillota
TTT
Lys
>WENV181726284
OGPZ01000352
235114
Bacillota
TTT
Lys
>WENV181726193
OGPZ01000161
429429
Bacillota
CCA
Trp
>WENV181726867
OGPZ01008340
41154
Bacillota
TAA
Leu
>WENV181726112
OGPZ01000048
44859
Bacillota
AAG
Leu
>WENV181726111
OGPZ01000048
44859
Bacillota
AAG
Leu
>WENV181727242
OGPZ01048452
11034
Bacillota
GGA
Ser
>WENV181727184
OGPZ01037043
274189
Bacillota
TGT
Thr
>WENV181726849
OGPZ01007729
235079
Bacillota
GAA
Phe
>WENV181726337
OGPZ01000471
295714
Bacillota
GCC
Gly
>WENV181726243
OGPZ01000271
295714
Bacillota
GCC
Gly
>WENV181727236
OGPZ01047634
162028
Bacillota
ACG
Arg
>WENV181726988
OGPZ01013402
173314
Bacillota
GAT
Ile
>WENV181726944
OGPZ01011354
338149
Bacillota
CTC
Glu
>WENV181726850
OGPZ01007729
271471
Bacillota
GCC
Gly
>WENV181726384
OGPZ01000661
37269
Bacillota
TGA
Ser
>WENV181726293
OGPZ01000366
155089
Bacillota
CAT
Met
>WENV181727005
OGPZ01014506
287000
Bacillota
GTT
Asn
>WENV181726399
OGPZ01000759
162445
Bacillota
CAT
Met
>WENV181726710
OGPZ01004060
152492
Bacillota
GGG
Pro
>WENV181726494
OGPZ01001342
152492
Bacillota
GGG
Pro
>WENV181726538
OGPZ01001824
235078
Bacillota
TAC
Val
>WENV181726198
OGPZ01000165
100326
Bacillota
GTA
Tyr
>WENV181726155
OGPZ01000086
100326
Bacillota
GTA
Tyr
>WENV181726316
OGPZ01000410
144610
Bacillota
GTG
His
>WENV181727111
OGPZ01025211
411547
Bacillota
CTG
Gln
>WENV181726807
OGPZ01006371
147684
Bacillota
ACG
Arg
>WENV181727022
OGPZ01015833
4624
Bacillota
GCT
Ser
>WENV181726448
OGPZ01000997
263765
Bacillota
TAC
Val
>WENV181727247
OGPZ01050574
412387
Bacillota
GCA
Cys
>WENV181726894
OGPZ01009675
235095
Bacillota
GGT
Thr
>WENV181726801
OGPZ01006361
344183
Bacillota
CTG
Gln
>WENV181727235
OGPZ01047634
37193
Bacillota
TAA
Leu
>WENV181727127
OGPZ01027434
411549
Bacillota
TTG
Gln
>WENV181726211
OGPZ01000180
235142
Bacillota
CTT
Lys
>WENV181726068
OGPZ01000020
235142
Bacillota
CTT
Lys
>WENV181727006
OGPZ01014610
148188
Bacillota
CCG
Arg
>WENV181726157
OGPZ01000087
256380
Bacillota
>WENV181726938
OGPZ01010856
298620
Bacillota
CAT
Met
>WENV181727207
OGPZ01039838
241432
Bacillota
TGT
Thr
>WENV181727104
OGPZ01024293
144583
Bacillota
ACG
Arg
>WENV181726499
OGPZ01001435
247734
Bacillota
TGC
Ala
>WENV181727227
OGPZ01045287
238974
Bacillota
GAA
Phe
>WENV181726279
OGPZ01000350
238974
Bacillota
GAA
Phe
>WENV181726200
OGPZ01000165
238974
Bacillota
GAA
Phe
>WENV181727015
OGPZ01015300
144621
Bacillota
GTT
Asn
>WENV181726283
OGPZ01000352
235113
Bacillota
GAA
Phe
>WENV181726074
OGPZ01000022
235113
Bacillota
GAA
Phe
>WENV181727048
OGPZ01017715
58712
Bacillota
CAG
Leu
>WENV181726945
OGPZ01011354
272992
Bacillota
CTT
Lys
>WENV181727106
OGPZ01024943
144594
Bacillota
CAC
Val
>WENV181726281
OGPZ01000352
95563
Bacillota
GTA
Tyr
>WENV181726154
OGPZ01000085
95563
Bacillota
GTA
Tyr
>WENV181726152
OGPZ01000081
414486
Bacillota
CCC
Gly
>WENV181726556
OGPZ01001884
272488
Bacillota
GAA
Phe
>WENV181726355
OGPZ01000534
114075
Bacillota
TAG
Leu
>WENV181727164
OGPZ01033137
292012
Bacillota
TGC
Ala
>WENV181727237
OGPZ01047634
146770
Bacillota
TTC
Glu
>WENV181727269
OGPZ01058998
273862
Bacillota
TGC
Ala
>WENV181726954
OGPZ01011713
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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