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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181769817
OGRB01000002
235134
Bacillota
GAA
Phe
>WENV181769818
OGRB01000002
240017
Bacillota
GCC
Gly
>WENV181769821
OGRB01000003
338147
Bacillota
CTC
Glu
>WENV181769855
OGRB01000026
148239
Bacillota
TCT
Arg
>WENV181769856
OGRB01000026
156937
Bacillota
GTG
His
>WENV181769897
OGRB01000065
272488
Bacillota
GAA
Phe
>WENV181769902
OGRB01000070
293599
Bacillota
CTT
Lys
>WENV181769912
OGRB01000085
411547
Bacillota
CTG
Gln
>WENV181769913
OGRB01000087
44859
Bacillota
AAG
Leu
>WENV181769914
OGRB01000087
44859
Bacillota
AAG
Leu
>WENV181769915
OGRB01000087
59312
Bacillota
CAG
Leu
>WENV181769935
OGRB01000112
338147
Bacillota
CTC
Glu
>WENV181769936
OGRB01000112
338147
Bacillota
CTC
Glu
>WENV181769937
OGRB01000112
338147
Bacillota
CTC
Glu
>WENV181769948
OGRB01000120
144610
Bacillota
GTG
His
>WENV181769950
OGRB01000120
235114
Bacillota
TTT
Lys
>WENV181769979
OGRB01000191
287000
Bacillota
GTT
Asn
>WENV181769983
OGRB01000198
295714
Bacillota
GCC
Gly
>WENV181770050
OGRB01000368
37071
Bacillota
TGA
Ser
>WENV181770053
OGRB01000383
235142
Bacillota
CTT
Lys
>WENV181770054
OGRB01000384
11034
Bacillota
GGA
Ser
>WENV181770058
OGRB01000391
95563
Bacillota
GTA
Tyr
>WENV181770064
OGRB01000415
267556
Bacillota
TAC
Val
>WENV181770065
OGRB01000415
162445
Bacillota
CAT
Met
>WENV181770075
OGRB01000434
152492
Bacillota
GGG
Pro
>WENV181770076
OGRB01000436
338147
Bacillota
CTC
Glu
>WENV181770083
OGRB01000459
295714
Bacillota
GCC
Gly
>WENV181770093
OGRB01000487
144610
Bacillota
GTG
His
>WENV181770118
OGRB01000574
235113
Bacillota
GAA
Phe
>WENV181770121
OGRB01000578
295714
Bacillota
GCC
Gly
>WENV181770177
OGRB01000902
235124
Bacillota
TGG
Pro
>WENV181770198
OGRB01000996
37269
Bacillota
TGA
Ser
>WENV181770209
OGRB01001088
267556
Bacillota
TAC
Val
>WENV181770210
OGRB01001088
162445
Bacillota
CAT
Met
>WENV181770214
OGRB01001102
58712
Bacillota
CAG
Leu
>WENV181770219
OGRB01001144
147684
Bacillota
ACG
Arg
>WENV181770227
OGRB01001233
144594
Bacillota
CAC
Val
>WENV181770232
OGRB01001272
235098
Bacillota
GAC
Val
>WENV181770246
OGRB01001317
58712
Bacillota
CAG
Leu
>WENV181770251
OGRB01001346
144612
Bacillota
TCT
Arg
>WENV181770261
OGRB01001435
235095
Bacillota
GGT
Thr
>WENV181770262
OGRB01001435
196621
Bacillota
GTC
Asp
>WENV181770263
OGRB01001435
235095
Bacillota
GGT
Thr
>WENV181770266
OGRB01001450
152492
Bacillota
GGG
Pro
>WENV181770276
OGRB01001593
338147
Bacillota
CTC
Glu
>WENV181770296
OGRB01001724
148188
Bacillota
CCG
Arg
>WENV181770307
OGRB01001934
41154
Bacillota
TAA
Leu
>WENV181770309
OGRB01001951
411549
Bacillota
TTG
Gln
>WENV181770311
OGRB01001961
429429
Bacillota
CCA
Trp
>WENV181770328
OGRB01002135
412387
Bacillota
GCA
Cys
>WENV181770329
OGRB01002160
293599
Bacillota
CTT
Lys
>WENV181770340
OGRB01002206
338149
Bacillota
CTC
Glu
>WENV181770341
OGRB01002206
144621
Bacillota
GTT
Asn
>WENV181770348
OGRB01002289
272992
Bacillota
CTT
Lys
>WENV181770354
OGRB01002352
338129
Bacillota
TGT
Thr
>WENV181770365
OGRB01002502
144612
Bacillota
TCT
Arg
>WENV181770369
OGRB01002517
411549
Bacillota
TTG
Gln
>WENV181770379
OGRB01002647
18852
Bacillota
GCT
Ser
>WENV181770387
OGRB01002803
245296
Bacillota
CCC
Gly
>WENV181770407
OGRB01003085
235171
Bacillota
CCA
Trp
>WENV181770408
OGRB01003085
196621
Bacillota
GTC
Asp
>WENV181770409
OGRB01003085
235095
Bacillota
GGT
Thr
>WENV181770426
OGRB01003509
80612
Bacillota
GTA
Tyr
>WENV181770430
OGRB01003662
58712
Bacillota
CAG
Leu
>WENV181770448
OGRB01003857
235142
Bacillota
CTT
Lys
>WENV181770454
OGRB01003891
44854
Bacillota
TGA
Ser
>WENV181770455
OGRB01003891
4624
Bacillota
GCT
Ser
>WENV181770466
OGRB01004114
144583
Bacillota
ACG
Arg
>WENV181770467
OGRB01004138
144621
Bacillota
GTT
Asn
>WENV181770491
OGRB01004804
16842
Bacillota
CGA
Ser
>WENV181770493
OGRB01004836
144594
Bacillota
CAC
Val
>WENV181770496
OGRB01004970
338149
Bacillota
CTC
Glu
>WENV181770497
OGRB01004970
144621
Bacillota
GTT
Asn
>WENV181770513
OGRB01005713
338128
Bacillota
TTC
Glu
>WENV181770515
OGRB01005766
144594
Bacillota
CAC
Val
>WENV181770517
OGRB01005904
411547
Bacillota
CTG
Gln
>WENV181770518
OGRB01005904
245298
Bacillota
CGG
Pro
>WENV181770520
OGRB01006059
100326
Bacillota
GTA
Tyr
>WENV181770540
OGRB01006891
238974
Bacillota
GAA
Phe
>WENV181770545
OGRB01007184
295714
Bacillota
GCC
Gly
>WENV181770556
OGRB01007534
429429
Bacillota
CCA
Trp
>WENV181770564
OGRB01007912
429443
Bacillota
GCA
Cys
>WENV181770573
OGRB01008366
11034
Bacillota
GGA
Ser
>WENV181770594
OGRB01009603
344183
Bacillota
CTG
Gln
>WENV181770599
OGRB01009761
242686
Bacillota
TGC
Ala
>WENV181770611
OGRB01009998
235098
Bacillota
GAC
Val
>WENV181770634
OGRB01012378
368876
Bacillota
GCC
Gly
>WENV181770636
OGRB01012378
37437
Bacillota
TAA
Leu
>WENV181770643
OGRB01013178
58712
Bacillota
CAG
Leu
>WENV181770653
OGRB01013755
246023
Bacillota
TGC
Ala
>WENV181770663
OGRB01014433
413657
Bacillota
CCC
Gly
>WENV181770672
OGRB01015843
37083
Bacillota
TGA
Ser
>WENV181770680
OGRB01016783
338152
Bacillota
TTC
Glu
>WENV181770681
OGRB01016987
194150
Bacillota
TGG
Pro
>WENV181770692
OGRB01018070
342895
Bacillota
CAT
Met
>WENV181770696
OGRB01018692
235150
Bacillota
TGC
Ala
>WENV181770708
OGRB01021395
341763
Bacillota
CTC
Glu
>WENV181770712
OGRB01022151
273029
Bacillota
TGT
Thr
>WENV181770715
OGRB01022151
281472
Bacillota
GGT
Thr
>WENV181770716
OGRB01022151
152491
Bacillota
CAT
Met
>WENV181770728
OGRB01023133
235098
Bacillota
GAC
Val
>WENV181770734
OGRB01023821
147135
Bacillota
ACG
Arg
>WENV181770735
OGRB01023822
235087
Bacillota
TGC
Ala
>WENV181770736
OGRB01023822
144577
Bacillota
GAT
Ile
>WENV181770737
OGRB01024184
235197
Bacillota
GTC
Asp
>WENV181770751
OGRB01027553
158247
Bacillota
>WENV181770771
OGRB01031733
338207
Bacillota
TTC
Glu
>WENV181770776
OGRB01031733
144762
Bacillota
TCT
Arg
>WENV181770778
OGRB01031957
243647
Bacillota
TTT
Lys
>WENV181770780
OGRB01031957
243612
Bacillota
TAC
Val
>WENV181770798
OGRB01037242
378157
Bacillota
TTC
Glu
>WENV181770807
OGRB01042800
16834
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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