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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181801279
OGSB01000035
127376
Bacillota
TAG
Leu
>WENV181801664
OGSB01007461
73175
Bacillota
CAA
Leu
>WENV181801643
OGSB01004561
345529
Bacillota
CTT
Lys
>WENV181801466
OGSB01000350
281299
Bacillota
TTT
Lys
>WENV181801477
OGSB01000350
281299
Bacillota
TTT
Lys
>WENV181801467
OGSB01000350
119388
Bacillota
TAG
Leu
>WENV181801470
OGSB01000350
184235
Bacillota
TCG
Arg
>WENV181801424
OGSB01000267
399268
Bacillota
ACG
Arg
>WENV181801556
OGSB01000874
280870
Bacillota
TGC
Ala
>WENV181801620
OGSB01002052
280870
Bacillota
TGC
Ala
>WENV181801464
OGSB01000350
292444
Bacillota
CTT
Lys
>WENV181801356
OGSB01000118
482407
Bacillota
TCC
Gly
>WENV181801392
OGSB01000209
482407
Bacillota
TCC
Gly
>WENV181801451
OGSB01000335
480520
Bacillota
TCC
Gly
>WENV181801469
OGSB01000350
480520
Bacillota
TCC
Gly
>WENV181801472
OGSB01000350
480520
Bacillota
TCC
Gly
>WENV181801473
OGSB01000350
480520
Bacillota
TCC
Gly
>WENV181801241
OGSB01000016
428916
Bacillota
CGT
Thr
>WENV181801178
OGSB01000001
184537
Bacillota
ACG
Arg
>WENV181801412
OGSB01000232
29462
Bacillota
GGA
Ser
>WENV181801188
OGSB01000001
408526
Bacillota
GCA
Cys
>WENV181801474
OGSB01000350
176679
Bacillota
TCT
Arg
>WENV181801471
OGSB01000350
176679
Bacillota
TCT
Arg
>WENV181801633
OGSB01002631
480576
Bacillota
GCA
Cys
>WENV181801659
OGSB01005063
480576
Bacillota
GCA
Cys
>WENV181801507
OGSB01000421
403916
Bacillota
CTG
Gln
>WENV181801355
OGSB01000118
456201
Bacillota
GCC
Gly
>WENV181801442
OGSB01000314
176678
Bacillota
GTC
Asp
>WENV181801439
OGSB01000291
289738
Bacillota
GGT
Thr
>WENV181801198
OGSB01000002
296855
Bacillota
GGT
Thr
>WENV181801194
OGSB01000002
48505
Bacillota
TGA
Ser
>WENV181801337
OGSB01000084
280639
Bacillota
TTT
Lys
>WENV181801395
OGSB01000209
280639
Bacillota
TTT
Lys
>WENV181801616
OGSB01001881
323166
Bacillota
TAC
Val
>WENV181801629
OGSB01002589
323166
Bacillota
TAC
Val
>WENV181801662
OGSB01005983
323166
Bacillota
TAC
Val
>WENV181801181
OGSB01000001
289717
Bacillota
CTT
Lys
>WENV181801594
OGSB01001172
27033
Bacillota
TGA
Ser
>WENV181801421
OGSB01000267
20274
Bacillota
GCT
Ser
>WENV181801423
OGSB01000267
20274
Bacillota
GCT
Ser
>WENV181801452
OGSB01000338
46686
Bacillota
TAA
Leu
>WENV181801481
OGSB01000370
46686
Bacillota
TAA
Leu
>WENV181801611
OGSB01001474
1281
Bacillota
>WENV181801218
OGSB01000006
20932
Bacillota
GCT
Ser
>WENV181801186
OGSB01000001
291553
Bacillota
GAA
Phe
>WENV181801220
OGSB01000006
291553
Bacillota
GAA
Phe
>WENV181801388
OGSB01000207
328418
Bacillota
GTT
Asn
>WENV181801184
OGSB01000001
482593
Bacillota
CCC
Gly
>WENV181801422
OGSB01000267
20238
Bacillota
TGA
Ser
>WENV181801557
OGSB01000874
20238
Bacillota
TGA
Ser
>WENV181801226
OGSB01000006
20942
Bacillota
GGA
Ser
>WENV181801468
OGSB01000350
400719
Bacillota
GCC
Gly
>WENV181801453
OGSB01000338
399266
Bacillota
>WENV181801454
OGSB01000338
399266
Bacillota
>WENV181801251
OGSB01000021
73130
Bacillota
CAA
Leu
>WENV181801652
OGSB01004650
399119
Bacillota
GTT
Asn
>WENV181801598
OGSB01001247
399434
Bacillota
CTC
Glu
>WENV181801647
OGSB01004561
140815
Bacillota
TAG
Leu
>WENV181801516
OGSB01000445
403917
Bacillota
CCT
Arg
>WENV181801602
OGSB01001342
281591
Bacillota
CCA
Trp
>WENV181801378
OGSB01000192
448353
Bacillota
CTC
Glu
>WENV181801651
OGSB01004561
281594
Bacillota
CTT
Lys
>WENV181801342
OGSB01000096
403924
Bacillota
CCG
Arg
>WENV181801199
OGSB01000002
184495
Bacillota
CAT
Met
>WENV181801183
OGSB01000001
141202
Bacillota
CAA
Leu
>WENV181801631
OGSB01002589
281590
Bacillota
TGT
Thr
>WENV181801640
OGSB01004143
281590
Bacillota
TGT
Thr
>WENV181801484
OGSB01000372
100988
Bacillota
AAG
Leu
>WENV181801263
OGSB01000024
150300
Bacillota
CAA
Leu
>WENV181801352
OGSB01000112
150300
Bacillota
CAA
Leu
>WENV181801646
OGSB01004561
281430
Bacillota
TTT
Lys
>WENV181801475
OGSB01000350
281302
Bacillota
GTG
His
>WENV181801195
OGSB01000002
289713
Bacillota
TGT
Thr
>WENV181801372
OGSB01000149
404091
Bacillota
TTG
Gln
>WENV181801354
OGSB01000116
281300
Bacillota
GAA
Phe
>WENV181801437
OGSB01000291
281300
Bacillota
GAA
Phe
>WENV181801433
OGSB01000281
399272
Bacillota
GCA
Cys
>WENV181801438
OGSB01000291
399272
Bacillota
GCA
Cys
>WENV181801371
OGSB01000149
289716
Bacillota
GTG
His
>WENV181801402
OGSB01000209
287736
Bacillota
TAC
Val
>WENV181801305
OGSB01000043
100994
Bacillota
GAG
Leu
>WENV181801492
OGSB01000390
100994
Bacillota
GAG
Leu
>WENV181801191
OGSB01000002
432453
Bacillota
TTC
Glu
>WENV181801203
OGSB01000002
432453
Bacillota
TTC
Glu
>WENV181801207
OGSB01000002
432453
Bacillota
TTC
Glu
>WENV181801223
OGSB01000006
480337
Bacillota
TCC
Gly
>WENV181801596
OGSB01001172
176919
Bacillota
ACG
Arg
>WENV181801403
OGSB01000209
225931
Bacillota
GAT
Ile
>WENV181801179
OGSB01000001
119459
Bacillota
TAG
Leu
>WENV181801645
OGSB01004561
402734
Bacillota
TTG
Gln
>WENV181801641
OGSB01004143
117940
Bacillota
GTA
Tyr
>WENV181801617
OGSB01001881
176917
Bacillota
GTC
Asp
>WENV181801630
OGSB01002589
176917
Bacillota
GTC
Asp
>WENV181801353
OGSB01000116
320500
Bacillota
TGG
Pro
>WENV181801450
OGSB01000335
320500
Bacillota
TGG
Pro
>WENV181801190
OGSB01000002
333281
Bacillota
GTT
Asn
>WENV181801201
OGSB01000002
333281
Bacillota
GTT
Asn
>WENV181801206
OGSB01000002
333281
Bacillota
GTT
Asn
>WENV181801603
OGSB01001362
399433
Bacillota
CCC
Gly
>WENV181801185
OGSB01000001
280547
Bacillota
GTC
Asp
>WENV181801219
OGSB01000006
280547
Bacillota
GTC
Asp
>WENV181801187
OGSB01000001
445407
Bacillota
GCC
Gly
>WENV181801200
OGSB01000002
445407
Bacillota
GCC
Gly
>WENV181801205
OGSB01000002
445407
Bacillota
GCC
Gly
>WENV181801202
OGSB01000002
289761
Bacillota
TTT
Lys
>WENV181801373
OGSB01000149
289761
Bacillota
TTT
Lys
>WENV181801628
OGSB01002589
449573
Bacillota
>WENV181801661
OGSB01005983
449573
Bacillota
>WENV181801644
OGSB01004561
281592
Bacillota
GTG
His
>WENV181801650
OGSB01004561
176918
Bacillota
TCT
Arg
>WENV181801298
OGSB01000038
320075
Bacillota
GAA
Phe
>WENV181801654
OGSB01004918
46697
Bacillota
TAA
Leu
>WENV181801192
OGSB01000002
289715
Bacillota
TAC
Val
>WENV181801204
OGSB01000002
289715
Bacillota
TAC
Val
>WENV181801208
OGSB01000002
289715
Bacillota
TAC
Val
>WENV181801225
OGSB01000006
20943
Bacillota
CGA
Ser
>WENV181801259
OGSB01000024
285847
Bacillota
GTG
His
>WENV181801222
OGSB01000006
208539
Bacillota
TGG
Pro
>WENV181801595
OGSB01001172
20288
Bacillota
GCT
Ser
>WENV181801224
OGSB01000006
184539
Bacillota
TCT
Arg
>WENV181801254
OGSB01000024
179645
Bacillota
GTC
Asp
>WENV181801347
OGSB01000112
179645
Bacillota
GTC
Asp
>WENV181801465
OGSB01000350
399264
Bacillota
TTG
Gln
>WENV181801476
OGSB01000350
399264
Bacillota
TTG
Gln
>WENV181801625
OGSB01002252
328987
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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