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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181810115
OGSU01000914
448352
Bacillota
GCC
Gly
>WENV181810047
OGSU01000411
280870
Bacillota
TGC
Ala
>WENV181810134
OGSU01001346
280870
Bacillota
TGC
Ala
>WENV181810183
OGSU01003632
280870
Bacillota
TGC
Ala
>WENV181810116
OGSU01000914
480520
Bacillota
TCC
Gly
>WENV181810219
OGSU01006788
398914
Bacillota
TGT
Thr
>WENV181809959
OGSU01000133
184537
Bacillota
ACG
Arg
>WENV181809931
OGSU01000079
408526
Bacillota
GCA
Cys
>WENV181810079
OGSU01000580
282753
Bacillota
TAC
Val
>WENV181810189
OGSU01004123
480359
Bacillota
TCC
Gly
>WENV181810221
OGSU01006788
480359
Bacillota
TCC
Gly
>WENV181809949
OGSU01000122
400111
Bacillota
GTT
Asn
>WENV181810023
OGSU01000359
400111
Bacillota
GTT
Asn
>WENV181810122
OGSU01001135
400111
Bacillota
GTT
Asn
>WENV181810080
OGSU01000580
176678
Bacillota
GTC
Asp
>WENV181809836
OGSU01000012
296855
Bacillota
GGT
Thr
>WENV181809870
OGSU01000029
48505
Bacillota
TGA
Ser
>WENV181810223
OGSU01006788
280642
Bacillota
TTG
Gln
>WENV181810247
OGSU01008645
280639
Bacillota
TTT
Lys
>WENV181809962
OGSU01000135
289717
Bacillota
CTT
Lys
>WENV181809988
OGSU01000214
20274
Bacillota
GCT
Ser
>WENV181810071
OGSU01000489
20360
Bacillota
TGA
Ser
>WENV181810094
OGSU01000819
20360
Bacillota
TGA
Ser
>WENV181810216
OGSU01006788
298270
Bacillota
TAC
Val
>WENV181810243
OGSU01008645
176018
Bacillota
CAT
Met
>WENV181810136
OGSU01001355
282752
Bacillota
TTT
Lys
>WENV181809923
OGSU01000077
46686
Bacillota
TAA
Leu
>WENV181809926
OGSU01000077
46686
Bacillota
TAA
Leu
>WENV181809973
OGSU01000164
20932
Bacillota
GCT
Ser
>WENV181809929
OGSU01000079
291553
Bacillota
GAA
Phe
>WENV181810098
OGSU01000841
291553
Bacillota
GAA
Phe
>WENV181810011
OGSU01000329
141334
Bacillota
TAG
Leu
>WENV181810114
OGSU01000914
141334
Bacillota
TAG
Leu
>WENV181809978
OGSU01000185
482593
Bacillota
CCC
Gly
>WENV181810222
OGSU01006788
176014
Bacillota
TCT
Arg
>WENV181810272
OGSU01012896
339995
Bacillota
TGC
Ala
>WENV181809979
OGSU01000190
441615
Bacillota
GTT
Asn
>WENV181809963
OGSU01000136
20942
Bacillota
GGA
Ser
>WENV181810013
OGSU01000329
291558
Bacillota
CTT
Lys
>WENV181809859
OGSU01000027
399266
Bacillota
>WENV181809927
OGSU01000077
399266
Bacillota
>WENV181810218
OGSU01006788
280641
Bacillota
GTT
Asn
>WENV181809860
OGSU01000027
280871
Bacillota
GAA
Phe
>WENV181809981
OGSU01000204
280871
Bacillota
GAA
Phe
>WENV181810078
OGSU01000556
280871
Bacillota
GAA
Phe
>WENV181809982
OGSU01000204
400112
Bacillota
GCC
Gly
>WENV181809837
OGSU01000012
184495
Bacillota
CAT
Met
>WENV181809896
OGSU01000054
141202
Bacillota
CAA
Leu
>WENV181810245
OGSU01008645
176015
Bacillota
TGG
Pro
>WENV181810001
OGSU01000246
29614
Bacillota
GGA
Ser
>WENV181809867
OGSU01000028
399041
Bacillota
CCA
Trp
>WENV181809868
OGSU01000028
399041
Bacillota
CCA
Trp
>WENV181810244
OGSU01008645
176016
Bacillota
CAT
Met
>WENV181809864
OGSU01000027
480905
Bacillota
TCC
Gly
>WENV181809983
OGSU01000204
480905
Bacillota
TCC
Gly
>WENV181810005
OGSU01000282
282756
Bacillota
CTT
Lys
>WENV181809865
OGSU01000027
282756
Bacillota
CTT
Lys
>WENV181810056
OGSU01000449
100098
Bacillota
GAG
Leu
>WENV181810111
OGSU01000914
281302
Bacillota
GTG
His
>WENV181809833
OGSU01000012
289713
Bacillota
TGT
Thr
>WENV181809905
OGSU01000067
404091
Bacillota
TTG
Gln
>WENV181809980
OGSU01000194
302187
Bacillota
CAT
Met
>WENV181810048
OGSU01000416
302187
Bacillota
CAT
Met
>WENV181810220
OGSU01006788
117762
Bacillota
GTA
Tyr
>WENV181809939
OGSU01000095
399272
Bacillota
GCA
Cys
>WENV181810131
OGSU01001294
178067
Bacillota
TCG
Arg
>WENV181809904
OGSU01000067
289716
Bacillota
GTG
His
>WENV181809851
OGSU01000020
73395
Bacillota
CAA
Leu
>WENV181810232
OGSU01008089
281022
Bacillota
GGT
Thr
>WENV181809854
OGSU01000024
100097
Bacillota
GTA
Tyr
>WENV181809858
OGSU01000026
52257
Bacillota
TAA
Leu
>WENV181809895
OGSU01000049
52257
Bacillota
TAA
Leu
>WENV181810070
OGSU01000489
20361
Bacillota
GCT
Ser
>WENV181810072
OGSU01000489
20361
Bacillota
GCT
Ser
>WENV181810207
OGSU01005359
323864
Bacillota
TGC
Ala
>WENV181810110
OGSU01000914
182384
Bacillota
TCT
Arg
>WENV181809831
OGSU01000012
432453
Bacillota
TTC
Glu
>WENV181810225
OGSU01006788
46655
Bacillota
TGA
Ser
>WENV181809969
OGSU01000150
480337
Bacillota
TCC
Gly
>WENV181810246
OGSU01008645
176019
Bacillota
GTG
His
>WENV181809960
OGSU01000133
119459
Bacillota
TAG
Leu
>WENV181809866
OGSU01000028
117940
Bacillota
GTA
Tyr
>WENV181809937
OGSU01000088
117940
Bacillota
GTA
Tyr
>WENV181810113
OGSU01000914
354380
Bacillota
TTT
Lys
>WENV181809830
OGSU01000012
333281
Bacillota
GTT
Asn
>WENV181810224
OGSU01006788
280643
Bacillota
TTT
Lys
>WENV181810231
OGSU01008089
399433
Bacillota
CCC
Gly
>WENV181809928
OGSU01000079
280547
Bacillota
GTC
Asp
>WENV181809930
OGSU01000079
445407
Bacillota
GCC
Gly
>WENV181810057
OGSU01000450
344985
Bacillota
GAA
Phe
>WENV181810252
OGSU01009484
344985
Bacillota
GAA
Phe
>WENV181809906
OGSU01000067
289761
Bacillota
TTT
Lys
>WENV181809999
OGSU01000246
178065
Bacillota
ACG
Arg
>WENV181809903
OGSU01000062
449573
Bacillota
>WENV181810081
OGSU01000580
282754
Bacillota
TGT
Thr
>WENV181809855
OGSU01000024
282758
Bacillota
CCA
Trp
>WENV181810058
OGSU01000450
484342
Bacillota
GCA
Cys
>WENV181809862
OGSU01000027
282755
Bacillota
GGT
Thr
>WENV181809832
OGSU01000012
289715
Bacillota
TAC
Val
>WENV181809971
OGSU01000150
20943
Bacillota
CGA
Ser
>WENV181809968
OGSU01000150
208539
Bacillota
TGG
Pro
>WENV181809970
OGSU01000150
184539
Bacillota
TCT
Arg
>WENV181810241
OGSU01008645
176017
Bacillota
GAT
Ile
>WENV181810000
OGSU01000246
400110
Bacillota
CCT
Arg
>WENV181809856
OGSU01000024
318172
Bacillota
CCA
Trp
>WENV181810109
OGSU01000914
328987
Bacillota
TGG
Pro
>WENV181810119
OGSU01001023
328987
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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