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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181820581
OGUD01000123
99852
Bacillota
GTA
Tyr
>WENV181820737
OGUD01000437
99852
Bacillota
GTA
Tyr
>WENV181820943
OGUD01002872
99852
Bacillota
GTA
Tyr
>WENV181820802
OGUD01000677
405363
Bacillota
GCA
Cys
>WENV181820532
OGUD01000068
290391
Bacillota
TAC
Val
>WENV181820559
OGUD01000095
290391
Bacillota
TAC
Val
>WENV181820561
OGUD01000095
290391
Bacillota
TAC
Val
>WENV181820644
OGUD01000223
280428
Bacillota
GAA
Phe
>WENV181820653
OGUD01000236
291579
Bacillota
GAA
Phe
>WENV181820642
OGUD01000223
280466
Bacillota
TAC
Val
>WENV181820637
OGUD01000206
175842
Bacillota
CAC
Val
>WENV181820836
OGUD01000911
175842
Bacillota
CAC
Val
>WENV181820975
OGUD01004553
287289
Bacillota
GCC
Gly
>WENV181821116
OGUD01030334
179176
Bacillota
ACG
Arg
>WENV181821087
OGUD01021426
141334
Bacillota
TAG
Leu
>WENV181820613
OGUD01000162
190476
Bacillota
CAT
Met
>WENV181820618
OGUD01000174
190476
Bacillota
CAT
Met
>WENV181820493
OGUD01000038
82124
Bacillota
TAA
Leu
>WENV181820486
OGUD01000033
73664
Bacillota
CAG
Leu
>WENV181820658
OGUD01000245
280447
Bacillota
GAC
Val
>WENV181820696
OGUD01000309
280447
Bacillota
GAC
Val
>WENV181820859
OGUD01001122
280447
Bacillota
GAC
Val
>WENV181820964
OGUD01003564
280447
Bacillota
GAC
Val
>WENV181820603
OGUD01000153
5692
Bacillota
GCT
Ser
>WENV181820766
OGUD01000525
5692
Bacillota
GCT
Ser
>WENV181820754
OGUD01000490
284723
Bacillota
TAC
Val
>WENV181820792
OGUD01000639
284723
Bacillota
TAC
Val
>WENV181820460
OGUD01000018
73009
Bacillota
CAG
Leu
>WENV181820481
OGUD01000030
73009
Bacillota
CAG
Leu
>WENV181820491
OGUD01000037
73009
Bacillota
CAG
Leu
>WENV181820697
OGUD01000313
481217
Bacillota
GCA
Cys
>WENV181820698
OGUD01000313
481217
Bacillota
GCA
Cys
>WENV181821086
OGUD01021426
283502
Bacillota
TTT
Lys
>WENV181821107
OGUD01029391
280708
Bacillota
TAC
Val
>WENV181821097
OGUD01025776
280646
Bacillota
TGC
Ala
>WENV181820463
OGUD01000018
291581
Bacillota
CGG
Pro
>WENV181820683
OGUD01000272
291581
Bacillota
CGG
Pro
>WENV181820479
OGUD01000030
175859
Bacillota
TCT
Arg
>WENV181820745
OGUD01000468
175859
Bacillota
TCT
Arg
>WENV181820704
OGUD01000338
21311
Bacillota
GCT
Ser
>WENV181820777
OGUD01000577
175831
Bacillota
ACG
Arg
>WENV181820665
OGUD01000249
179810
Bacillota
TCT
Arg
>WENV181820624
OGUD01000181
284627
Bacillota
GAA
Phe
>WENV181820998
OGUD01005722
176015
Bacillota
TGG
Pro
>WENV181820446
OGUD01000010
294020
Bacillota
TAC
Val
>WENV181820705
OGUD01000343
294020
Bacillota
TAC
Val
>WENV181820707
OGUD01000343
294020
Bacillota
TAC
Val
>WENV181820462
OGUD01000018
480322
Bacillota
CTG
Gln
>WENV181820558
OGUD01000093
480322
Bacillota
CTG
Gln
>WENV181820576
OGUD01000117
480322
Bacillota
CTG
Gln
>WENV181820682
OGUD01000272
480322
Bacillota
CTG
Gln
>WENV181820447
OGUD01000010
187364
Bacillota
CAT
Met
>WENV181821114
OGUD01029782
282867
Bacillota
TGT
Thr
>WENV181820548
OGUD01000076
175868
Bacillota
GTT
Asn
>WENV181820551
OGUD01000079
175868
Bacillota
GTT
Asn
>WENV181820567
OGUD01000101
175868
Bacillota
GTT
Asn
>WENV181820728
OGUD01000415
175868
Bacillota
GTT
Asn
>WENV181820549
OGUD01000079
322848
Bacillota
CTT
Lys
>WENV181820550
OGUD01000079
398854
Bacillota
CTC
Glu
>WENV181820727
OGUD01000415
398854
Bacillota
CTC
Glu
>WENV181820579
OGUD01000122
291576
Bacillota
CCC
Gly
>WENV181820784
OGUD01000610
291576
Bacillota
CCC
Gly
>WENV181820461
OGUD01000018
480324
Bacillota
TTG
Gln
>WENV181820466
OGUD01000020
480324
Bacillota
TTG
Gln
>WENV181821112
OGUD01029782
178143
Bacillota
TTC
Glu
>WENV181820945
OGUD01003026
323864
Bacillota
TGC
Ala
>WENV181820942
OGUD01002860
292374
Bacillota
TGC
Ala
>WENV181820999
OGUD01005722
176019
Bacillota
GTG
His
>WENV181820535
OGUD01000069
398857
Bacillota
TTC
Glu
>WENV181820674
OGUD01000260
280444
Bacillota
GGT
Thr
>WENV181820675
OGUD01000260
280444
Bacillota
GGT
Thr
>WENV181820795
OGUD01000652
280444
Bacillota
GGT
Thr
>WENV181820798
OGUD01000652
280444
Bacillota
GGT
Thr
>WENV181820546
OGUD01000075
483485
Bacillota
CCC
Gly
>WENV181820641
OGUD01000223
321753
Bacillota
GCC
Gly
>WENV181820645
OGUD01000223
321753
Bacillota
GCC
Gly
>WENV181820612
OGUD01000162
179755
Bacillota
CCG
Arg
>WENV181820617
OGUD01000174
179755
Bacillota
CCG
Arg
>WENV181821034
OGUD01009088
58120
Bacillota
AAG
Leu
>WENV181820614
OGUD01000162
398832
Bacillota
TTC
Glu
>WENV181820619
OGUD01000174
398832
Bacillota
TTC
Glu
>WENV181820492
OGUD01000038
118669
Bacillota
GTA
Tyr
>WENV181820622
OGUD01000181
118669
Bacillota
GTA
Tyr
>WENV181820654
OGUD01000236
280476
Bacillota
TTT
Lys
>WENV181820783
OGUD01000609
309916
Bacillota
TTT
Lys
>WENV181820941
OGUD01002860
201856
Bacillota
GAT
Ile
>WENV181820474
OGUD01000029
321248
Bacillota
TAC
Val
>WENV181820476
OGUD01000029
321248
Bacillota
TAC
Val
>WENV181820947
OGUD01003026
298260
Bacillota
GTT
Asn
>WENV181820584
OGUD01000129
406186
Bacillota
CTC
Glu
>WENV181820837
OGUD01000912
406186
Bacillota
CTC
Glu
>WENV181820666
OGUD01000249
175857
Bacillota
GTG
His
>WENV181820467
OGUD01000021
398833
Bacillota
TGT
Thr
>WENV181820580
OGUD01000123
398833
Bacillota
TGT
Thr
>WENV181820643
OGUD01000223
175849
Bacillota
GTC
Asp
>WENV181820673
OGUD01000260
175849
Bacillota
GTC
Asp
>WENV181820797
OGUD01000652
175849
Bacillota
GTC
Asp
>WENV181820602
OGUD01000153
56074
Bacillota
TGA
Ser
>WENV181820765
OGUD01000525
56074
Bacillota
TGA
Ser
>WENV181820681
OGUD01000272
280473
Bacillota
TGG
Pro
>WENV181820820
OGUD01000880
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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