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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181834259
OGUR01000001
267649
Bacillota
TAC
Val
>WENV181834261
OGUR01000001
267649
Bacillota
TAC
Val
>WENV181834268
OGUR01000003
144672
Bacillota
TCT
Arg
>WENV181834278
OGUR01000011
59296
Bacillota
AAG
Leu
>WENV181834281
OGUR01000025
154063
Bacillota
CGG
Pro
>WENV181834287
OGUR01000029
18852
Bacillota
GCT
Ser
>WENV181834291
OGUR01000031
59312
Bacillota
CAG
Leu
>WENV181834297
OGUR01000042
338143
Bacillota
CTC
Glu
>WENV181834300
OGUR01000043
144672
Bacillota
TCT
Arg
>WENV181834321
OGUR01000069
147684
Bacillota
ACG
Arg
>WENV181834323
OGUR01000070
287000
Bacillota
GTT
Asn
>WENV181834334
OGUR01000098
313454
Bacillota
GAA
Phe
>WENV181834335
OGUR01000098
419877
Bacillota
TCC
Gly
>WENV181834336
OGUR01000098
157635
Bacillota
TCT
Arg
>WENV181834337
OGUR01000098
156937
Bacillota
GTG
His
>WENV181834342
OGUR01000100
154063
Bacillota
CGG
Pro
>WENV181834351
OGUR01000121
429443
Bacillota
GCA
Cys
>WENV181834360
OGUR01000133
37269
Bacillota
TGA
Ser
>WENV181834367
OGUR01000136
235154
Bacillota
GTT
Asn
>WENV181834368
OGUR01000137
313454
Bacillota
GAA
Phe
>WENV181834371
OGUR01000139
18852
Bacillota
GCT
Ser
>WENV181834382
OGUR01000179
23769
Bacillota
TAA
Leu
>WENV181834390
OGUR01000209
152492
Bacillota
GGG
Pro
>WENV181834393
OGUR01000214
147674
Bacillota
TCT
Arg
>WENV181834396
OGUR01000214
313164
Bacillota
TTT
Lys
>WENV181834403
OGUR01000238
235638
Bacillota
GAA
Phe
>WENV181834417
OGUR01000317
59296
Bacillota
AAG
Leu
>WENV181834422
OGUR01000325
338131
Bacillota
GCC
Gly
>WENV181834439
OGUR01000403
258936
Bacillota
GGT
Thr
>WENV181834448
OGUR01000442
313454
Bacillota
GAA
Phe
>WENV181834449
OGUR01000442
313164
Bacillota
TTT
Lys
>WENV181834452
OGUR01000462
338550
Bacillota
>WENV181834462
OGUR01000550
150597
Bacillota
TCT
Arg
>WENV181834463
OGUR01000550
235905
Bacillota
GTG
His
>WENV181834468
OGUR01000586
42270
Bacillota
>WENV181834484
OGUR01000746
37110
Bacillota
TAA
Leu
>WENV181834486
OGUR01000746
194265
Bacillota
CAT
Met
>WENV181834487
OGUR01000766
198159
Bacillota
CAT
Met
>WENV181834488
OGUR01000766
235506
Bacillota
TGC
Ala
>WENV181834504
OGUR01001116
319167
Bacillota
CAT
Met
>WENV181834506
OGUR01001116
436750
Bacillota
TCC
Gly
>WENV181834509
OGUR01001116
392638
Bacillota
TGT
Thr
>WENV181834511
OGUR01001142
44874
Bacillota
CAA
Leu
>WENV181834529
OGUR01001328
118077
Bacillota
>WENV181834530
OGUR01001328
338208
Bacillota
>WENV181834531
OGUR01001328
144762
Bacillota
TCT
Arg
>WENV181834534
OGUR01001328
379268
Bacillota
TTC
Glu
>WENV181834535
OGUR01001328
411584
Bacillota
TCC
Gly
>WENV181834538
OGUR01001361
1080
Bacillota
>WENV181834541
OGUR01001451
429429
Bacillota
CCA
Trp
>WENV181834542
OGUR01001473
16235
Bacillota
>WENV181834551
OGUR01002196
338545
Bacillota
>WENV181834552
OGUR01002196
312468
Bacillota
TAC
Val
>WENV181834553
OGUR01002196
186380
Bacillota
GTC
Asp
>WENV181834559
OGUR01002403
344320
Bacillota
GTT
Asn
>WENV181834560
OGUR01002404
114359
Bacillota
TAG
Leu
>WENV181834561
OGUR01002404
361659
Bacillota
GCC
Gly
>WENV181834562
OGUR01002404
411739
Bacillota
TCC
Gly
>WENV181834582
OGUR01004201
235294
Bacillota
TGC
Ala
>WENV181834586
OGUR01004780
16815
Bacillota
TGA
Ser
>WENV181834603
OGUR01010026
235137
Bacillota
TGC
Ala
>WENV181834615
OGUR01016290
316443
Bacillota
GTC
Asp
>WENV181834617
OGUR01016290
109476
Bacillota
TAG
Leu
>WENV181834625
OGUR01017364
10560
Bacillota
GGA
Ser
>WENV181834656
OGUR01074399
239832
Bacillota
TGT
Thr
>WENV181834661
OGUR01097453
235289
Bacillota
GTT
Asn
>WENV181834663
OGUR01122178
95737
Bacillota
GTA
Tyr
>WENV181834666
OGUR01137887
162028
Bacillota
ACG
Arg
>WENV181834682
OGUR01233022
235906
Bacillota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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