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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181977445
OHAE01000013
263765
Bacillota
TAC
Val
>WENV181977446
OHAE01000013
240017
Bacillota
GCC
Gly
>WENV181977486
OHAE01000058
263765
Bacillota
TAC
Val
>WENV181977493
OHAE01000061
293599
Bacillota
CTT
Lys
>WENV181977528
OHAE01000107
267556
Bacillota
TAC
Val
>WENV181977536
OHAE01000130
147684
Bacillota
ACG
Arg
>WENV181977537
OHAE01000132
263765
Bacillota
TAC
Val
>WENV181977613
OHAE01000271
24650
Bacillota
TAA
Leu
>WENV181977629
OHAE01000288
287000
Bacillota
GTT
Asn
>WENV181977630
OHAE01000288
338152
Bacillota
TTC
Glu
>WENV181977639
OHAE01000302
263765
Bacillota
TAC
Val
>WENV181977669
OHAE01000388
267556
Bacillota
TAC
Val
>WENV181977670
OHAE01000388
162445
Bacillota
CAT
Met
>WENV181977694
OHAE01000441
247734
Bacillota
TGC
Ala
>WENV181977720
OHAE01000495
155273
Bacillota
CAT
Met
>WENV181977741
OHAE01000540
158247
Bacillota
>WENV181977750
OHAE01000554
263765
Bacillota
TAC
Val
>WENV181977753
OHAE01000554
271471
Bacillota
GCC
Gly
>WENV181977758
OHAE01000582
59312
Bacillota
CAG
Leu
>WENV181977766
OHAE01000599
295714
Bacillota
GCC
Gly
>WENV181977772
OHAE01000626
59312
Bacillota
CAG
Leu
>WENV181977850
OHAE01000897
338147
Bacillota
CTC
Glu
>WENV181977851
OHAE01000897
338147
Bacillota
CTC
Glu
>WENV181977868
OHAE01001019
263765
Bacillota
TAC
Val
>WENV181977870
OHAE01001019
271471
Bacillota
GCC
Gly
>WENV181977871
OHAE01001019
428544
Bacillota
GCA
Cys
>WENV181977887
OHAE01001187
152492
Bacillota
GGG
Pro
>WENV181977891
OHAE01001197
338128
Bacillota
TTC
Glu
>WENV181977897
OHAE01001212
235098
Bacillota
GAC
Val
>WENV181977949
OHAE01001633
274189
Bacillota
TGT
Thr
>WENV181977958
OHAE01001657
344183
Bacillota
CTG
Gln
>WENV181977970
OHAE01001771
58712
Bacillota
CAG
Leu
>WENV181977979
OHAE01001823
100326
Bacillota
GTA
Tyr
>WENV181977999
OHAE01002093
411549
Bacillota
TTG
Gln
>WENV181978000
OHAE01002093
411547
Bacillota
CTG
Gln
>WENV181978001
OHAE01002093
245298
Bacillota
CGG
Pro
>WENV181978039
OHAE01002381
419877
Bacillota
TCC
Gly
>WENV181978056
OHAE01002554
414486
Bacillota
CCC
Gly
>WENV181978068
OHAE01002631
347827
Bacillota
TTC
Glu
>WENV181978076
OHAE01002744
338147
Bacillota
CTC
Glu
>WENV181978118
OHAE01003231
245296
Bacillota
CCC
Gly
>WENV181978166
OHAE01003852
144610
Bacillota
GTG
His
>WENV181978167
OHAE01003852
340802
Bacillota
TTG
Gln
>WENV181978172
OHAE01003970
411547
Bacillota
CTG
Gln
>WENV181978191
OHAE01004289
235079
Bacillota
GAA
Phe
>WENV181978192
OHAE01004289
271471
Bacillota
GCC
Gly
>WENV181978212
OHAE01004775
338149
Bacillota
CTC
Glu
>WENV181978213
OHAE01004775
144621
Bacillota
GTT
Asn
>WENV181978226
OHAE01005035
148188
Bacillota
CCG
Arg
>WENV181978227
OHAE01005070
338129
Bacillota
TGT
Thr
>WENV181978235
OHAE01005300
41154
Bacillota
TAA
Leu
>WENV181978242
OHAE01005512
379268
Bacillota
TTC
Glu
>WENV181978245
OHAE01005666
80612
Bacillota
GTA
Tyr
>WENV181978260
OHAE01006039
429429
Bacillota
CCA
Trp
>WENV181978269
OHAE01006279
144594
Bacillota
CAC
Val
>WENV181978275
OHAE01006384
338128
Bacillota
TTC
Glu
>WENV181978280
OHAE01006472
16820
Bacillota
GCT
Ser
>WENV181978298
OHAE01007146
58712
Bacillota
CAG
Leu
>WENV181978308
OHAE01007742
37551
Bacillota
CGA
Ser
>WENV181978311
OHAE01008053
114002
Bacillota
CAA
Leu
>WENV181978323
OHAE01008391
256380
Bacillota
>WENV181978330
OHAE01008487
144583
Bacillota
ACG
Arg
>WENV181978334
OHAE01008619
194150
Bacillota
TGG
Pro
>WENV181978343
OHAE01009151
245386
Bacillota
CCA
Trp
>WENV181978350
OHAE01009722
16842
Bacillota
CGA
Ser
>WENV181978358
OHAE01010344
44854
Bacillota
TGA
Ser
>WENV181978359
OHAE01010344
4624
Bacillota
GCT
Ser
>WENV181978374
OHAE01010957
243613
Bacillota
GTG
His
>WENV181978379
OHAE01011124
80612
Bacillota
GTA
Tyr
>WENV181978381
OHAE01011222
152047
Bacillota
GGG
Pro
>WENV181978401
OHAE01011966
144612
Bacillota
TCT
Arg
>WENV181978414
OHAE01012802
338147
Bacillota
CTC
Glu
>WENV181978415
OHAE01012810
147684
Bacillota
ACG
Arg
>WENV181978426
OHAE01013516
100326
Bacillota
GTA
Tyr
>WENV181978436
OHAE01014357
37588
Bacillota
TGA
Ser
>WENV181978439
OHAE01014411
238910
Bacillota
CTT
Lys
>WENV181978442
OHAE01014601
147135
Bacillota
ACG
Arg
>WENV181978477
OHAE01017235
11034
Bacillota
GGA
Ser
>WENV181978480
OHAE01017470
193585
Bacillota
CGG
Pro
>WENV181978496
OHAE01018823
235124
Bacillota
TGG
Pro
>WENV181978511
OHAE01020992
235197
Bacillota
GTC
Asp
>WENV181978516
OHAE01021390
342895
Bacillota
CAT
Met
>WENV181978522
OHAE01021944
114075
Bacillota
TAG
Leu
>WENV181978530
OHAE01023411
235095
Bacillota
GGT
Thr
>WENV181978541
OHAE01024472
173314
Bacillota
GAT
Ile
>WENV181978552
OHAE01025286
37437
Bacillota
TAA
Leu
>WENV181978557
OHAE01025673
338143
Bacillota
CTC
Glu
>WENV181978575
OHAE01028355
343021
Bacillota
CAT
Met
>WENV181978591
OHAE01029795
18852
Bacillota
GCT
Ser
>WENV181978599
OHAE01032027
154063
Bacillota
CGG
Pro
>WENV181978611
OHAE01033317
155089
Bacillota
CAT
Met
>WENV181978661
OHAE01044573
235171
Bacillota
CCA
Trp
>WENV181978670
OHAE01045957
298639
Bacillota
GTT
Asn
>WENV181978684
OHAE01049511
340265
Bacillota
GCC
Gly
>WENV181978689
OHAE01051446
152512
Bacillota
CCT
Arg
>WENV181978694
OHAE01052332
59296
Bacillota
AAG
Leu
>WENV181978716
OHAE01058199
345314
Bacillota
TTG
Gln
>WENV181978719
OHAE01058571
243119
Bacillota
CTT
Lys
>WENV181978720
OHAE01058646
235150
Bacillota
TGC
Ala
>WENV181978726
OHAE01059527
243399
Bacillota
CCA
Trp
>WENV181978727
OHAE01059527
152051
Bacillota
ACG
Arg
>WENV181978730
OHAE01059787
152513
Bacillota
GAC
Val
>WENV181978739
OHAE01062023
338131
Bacillota
GCC
Gly
>WENV181978747
OHAE01064726
296878
Bacillota
GTT
Asn
>WENV181978752
OHAE01066331
413657
Bacillota
CCC
Gly
>WENV181978770
OHAE01068855
144612
Bacillota
TCT
Arg
>WENV181978786
OHAE01073111
243612
Bacillota
TAC
Val
>WENV181978787
OHAE01073138
44859
Bacillota
AAG
Leu
>WENV181978791
OHAE01075216
152046
Bacillota
TCT
Arg
>WENV181978808
OHAE01080114
235137
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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