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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181993089
OHAS01000001
37083
Bacillota
TGA
Ser
>WENV181993093
OHAS01000003
263765
Bacillota
TAC
Val
>WENV181993118
OHAS01000020
263765
Bacillota
TAC
Val
>WENV181993148
OHAS01000067
414486
Bacillota
CCC
Gly
>WENV181993161
OHAS01000089
59727
Bacillota
CAG
Leu
>WENV181993169
OHAS01000111
271471
Bacillota
GCC
Gly
>WENV181993173
OHAS01000113
388249
Bacillota
GCA
Cys
>WENV181993193
OHAS01000144
272488
Bacillota
GAA
Phe
>WENV181993198
OHAS01000150
45160
Bacillota
CAA
Leu
>WENV181993215
OHAS01000195
37363
Bacillota
AAG
Leu
>WENV181993240
OHAS01000250
147487
Bacillota
ACG
Arg
>WENV181993242
OHAS01000250
149309
Bacillota
CGG
Pro
>WENV181993277
OHAS01000336
148239
Bacillota
TCT
Arg
>WENV181993278
OHAS01000336
156937
Bacillota
GTG
His
>WENV181993287
OHAS01000347
240191
Bacillota
GGT
Thr
>WENV181993289
OHAS01000349
59312
Bacillota
CAG
Leu
>WENV181993303
OHAS01000371
301373
Bacillota
CTC
Glu
>WENV181993321
OHAS01000446
256380
Bacillota
>WENV181993333
OHAS01000516
241432
Bacillota
TGT
Thr
>WENV181993342
OHAS01000537
240192
Bacillota
CTG
Gln
>WENV181993361
OHAS01000615
235078
Bacillota
TAC
Val
>WENV181993362
OHAS01000615
240017
Bacillota
GCC
Gly
>WENV181993366
OHAS01000632
412886
Bacillota
CCC
Gly
>WENV181993378
OHAS01000688
272488
Bacillota
GAA
Phe
>WENV181993447
OHAS01000977
339890
Bacillota
TTG
Gln
>WENV181993449
OHAS01000990
272488
Bacillota
GAA
Phe
>WENV181993484
OHAS01001121
149310
Bacillota
TCT
Arg
>WENV181993549
OHAS01001523
155273
Bacillota
CAT
Met
>WENV181993553
OHAS01001543
16596
Bacillota
CGA
Ser
>WENV181993554
OHAS01001552
411547
Bacillota
CTG
Gln
>WENV181993560
OHAS01001617
144612
Bacillota
TCT
Arg
>WENV181993568
OHAS01001638
412387
Bacillota
GCA
Cys
>WENV181993570
OHAS01001659
144610
Bacillota
GTG
His
>WENV181993575
OHAS01001729
37269
Bacillota
TGA
Ser
>WENV181993578
OHAS01001748
155089
Bacillota
CAT
Met
>WENV181993608
OHAS01001941
302152
Bacillota
CTT
Lys
>WENV181993612
OHAS01001959
44854
Bacillota
TGA
Ser
>WENV181993613
OHAS01001959
4624
Bacillota
GCT
Ser
>WENV181993626
OHAS01002081
37269
Bacillota
TGA
Ser
>WENV181993627
OHAS01002081
10680
Bacillota
GGA
Ser
>WENV181993644
OHAS01002208
235098
Bacillota
GAC
Val
>WENV181993655
OHAS01002406
272992
Bacillota
CTT
Lys
>WENV181993656
OHAS01002406
338149
Bacillota
CTC
Glu
>WENV181993657
OHAS01002406
144621
Bacillota
GTT
Asn
>WENV181993660
OHAS01002415
37269
Bacillota
TGA
Ser
>WENV181993698
OHAS01002753
235095
Bacillota
GGT
Thr
>WENV181993699
OHAS01002753
196621
Bacillota
GTC
Asp
>WENV181993700
OHAS01002753
235095
Bacillota
GGT
Thr
>WENV181993720
OHAS01003095
185292
Bacillota
ACG
Arg
>WENV181993728
OHAS01003157
147674
Bacillota
TCT
Arg
>WENV181993744
OHAS01003282
100326
Bacillota
GTA
Tyr
>WENV181993768
OHAS01003685
163943
Bacillota
GTC
Asp
>WENV181993773
OHAS01003793
144583
Bacillota
ACG
Arg
>WENV181993783
OHAS01003934
18852
Bacillota
GCT
Ser
>WENV181993791
OHAS01004040
338676
Bacillota
CCG
Arg
>WENV181993802
OHAS01004267
238857
Bacillota
CCA
Trp
>WENV181993828
OHAS01004565
149311
Bacillota
CCT
Arg
>WENV181993871
OHAS01005150
144612
Bacillota
TCT
Arg
>WENV181993919
OHAS01006376
237957
Bacillota
GTT
Asn
>WENV181993920
OHAS01006376
7070
Bacillota
GGA
Ser
>WENV181993921
OHAS01006376
385980
Bacillota
TTC
Glu
>WENV181993922
OHAS01006376
258820
Bacillota
CGT
Thr
>WENV181993943
OHAS01006911
23769
Bacillota
TAA
Leu
>WENV181993951
OHAS01007099
304022
Bacillota
GCC
Gly
>WENV181993953
OHAS01007099
411549
Bacillota
TTG
Gln
>WENV181993967
OHAS01007308
338128
Bacillota
TTC
Glu
>WENV181993980
OHAS01007600
148188
Bacillota
CCG
Arg
>WENV181993995
OHAS01008050
58712
Bacillota
CAG
Leu
>WENV181994023
OHAS01008758
147684
Bacillota
ACG
Arg
>WENV181994024
OHAS01008833
152492
Bacillota
GGG
Pro
>WENV181994044
OHAS01009427
247734
Bacillota
TGC
Ala
>WENV181994052
OHAS01009597
338129
Bacillota
TGT
Thr
>WENV181994067
OHAS01009936
412387
Bacillota
GCA
Cys
>WENV181994087
OHAS01010773
299139
Bacillota
TGC
Ala
>WENV181994140
OHAS01012521
235154
Bacillota
GTT
Asn
>WENV181994159
OHAS01013166
429429
Bacillota
CCA
Trp
>WENV181994180
OHAS01014263
59296
Bacillota
AAG
Leu
>WENV181994186
OHAS01014389
11034
Bacillota
GGA
Ser
>WENV181994190
OHAS01014429
144594
Bacillota
CAC
Val
>WENV181994207
OHAS01015763
37213
Bacillota
TGA
Ser
>WENV181994233
OHAS01017795
298620
Bacillota
CAT
Met
>WENV181994267
OHAS01020129
292012
Bacillota
TGC
Ala
>WENV181994287
OHAS01022275
341763
Bacillota
CTC
Glu
>WENV181994305
OHAS01024744
201704
Bacillota
GAT
Ile
>WENV181994306
OHAS01024744
246023
Bacillota
TGC
Ala
>WENV181994309
OHAS01025070
202812
Bacillota
CAT
Met
>WENV181994314
OHAS01025970
196632
Bacillota
GTC
Asp
>WENV181994315
OHAS01025970
344240
Bacillota
GCC
Gly
>WENV181994342
OHAS01028415
345314
Bacillota
TTG
Gln
>WENV181994389
OHAS01034544
144621
Bacillota
GTT
Asn
>WENV181994397
OHAS01035852
235095
Bacillota
GGT
Thr
>WENV181994402
OHAS01036810
235124
Bacillota
TGG
Pro
>WENV181994406
OHAS01036992
338143
Bacillota
CTC
Glu
>WENV181994465
OHAS01050415
413152
Bacillota
TCC
Gly
>WENV181994539
OHAS01070068
338147
Bacillota
CTC
Glu
>WENV181994550
OHAS01074088
152149
Bacillota
GTG
His
>WENV181994553
OHAS01074234
299139
Bacillota
TGC
Ala
>WENV181994554
OHAS01074234
198135
Bacillota
GAT
Ile
>WENV181994560
OHAS01077686
7065
Bacillota
GCT
Ser
>WENV181994574
OHAS01082990
198135
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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