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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182053734
OHEJ01000734
196621
Bacillota
GTC
Asp
>WENV182053671
OHEJ01000393
144612
Bacillota
TCT
Arg
>WENV182053540
OHEJ01000028
154063
Bacillota
CGG
Pro
>WENV182053741
OHEJ01000844
267649
Bacillota
TAC
Val
>WENV182054201
OHEJ01021930
235134
Bacillota
GAA
Phe
>WENV182053662
OHEJ01000345
235098
Bacillota
GAC
Val
>WENV182054147
OHEJ01016572
235098
Bacillota
GAC
Val
>WENV182053599
OHEJ01000121
44854
Bacillota
TGA
Ser
>WENV182054262
OHEJ01031598
37071
Bacillota
TGA
Ser
>WENV182054163
OHEJ01018147
429443
Bacillota
GCA
Cys
>WENV182053659
OHEJ01000325
307003
Bacillota
TGC
Ala
>WENV182053692
OHEJ01000487
59312
Bacillota
CAG
Leu
>WENV182053770
OHEJ01001305
338147
Bacillota
CTC
Glu
>WENV182054151
OHEJ01016709
235150
Bacillota
TGC
Ala
>WENV182054102
OHEJ01013486
235114
Bacillota
TTT
Lys
>WENV182054336
OHEJ01050366
429429
Bacillota
CCA
Trp
>WENV182053691
OHEJ01000487
44859
Bacillota
AAG
Leu
>WENV182054138
OHEJ01015845
11034
Bacillota
GGA
Ser
>WENV182053634
OHEJ01000201
11034
Bacillota
GGA
Ser
>WENV182053646
OHEJ01000248
274189
Bacillota
TGT
Thr
>WENV182054066
OHEJ01012194
173314
Bacillota
GAT
Ile
>WENV182053855
OHEJ01003421
338149
Bacillota
CTC
Glu
>WENV182053834
OHEJ01002942
338149
Bacillota
CTC
Glu
>WENV182053974
OHEJ01008590
245298
Bacillota
CGG
Pro
>WENV182053858
OHEJ01003439
235078
Bacillota
TAC
Val
>WENV182054202
OHEJ01021930
240017
Bacillota
GCC
Gly
>WENV182053715
OHEJ01000575
411547
Bacillota
CTG
Gln
>WENV182054114
OHEJ01014247
147684
Bacillota
ACG
Arg
>WENV182053600
OHEJ01000121
4624
Bacillota
GCT
Ser
>WENV182053686
OHEJ01000463
235095
Bacillota
GGT
Thr
>WENV182053667
OHEJ01000364
411549
Bacillota
TTG
Gln
>WENV182053888
OHEJ01004376
148188
Bacillota
CCG
Arg
>WENV182053782
OHEJ01001651
80612
Bacillota
GTA
Tyr
>WENV182053651
OHEJ01000256
80612
Bacillota
GTA
Tyr
>WENV182053826
OHEJ01002715
368876
Bacillota
GCC
Gly
>WENV182053987
OHEJ01009567
249522
Bacillota
TAC
Val
>WENV182053649
OHEJ01000253
235124
Bacillota
TGG
Pro
>WENV182053857
OHEJ01003435
338129
Bacillota
TGT
Thr
>WENV182053669
OHEJ01000374
144583
Bacillota
ACG
Arg
>WENV182054053
OHEJ01011879
247734
Bacillota
TGC
Ala
>WENV182053733
OHEJ01000734
235171
Bacillota
CCA
Trp
>WENV182054222
OHEJ01023417
91122
Bacillota
CAA
Leu
>WENV182053856
OHEJ01003421
144621
Bacillota
GTT
Asn
>WENV182053735
OHEJ01000773
144621
Bacillota
GTT
Asn
>WENV182054101
OHEJ01013486
235113
Bacillota
GAA
Phe
>WENV182053683
OHEJ01000433
58712
Bacillota
CAG
Leu
>WENV182053986
OHEJ01009275
245296
Bacillota
CCC
Gly
>WENV182053835
OHEJ01002942
272992
Bacillota
CTT
Lys
>WENV182054001
OHEJ01010259
338545
Bacillota
>WENV182053729
OHEJ01000721
144594
Bacillota
CAC
Val
>WENV182053866
OHEJ01003728
95563
Bacillota
GTA
Tyr
>WENV182053688
OHEJ01000475
272488
Bacillota
GAA
Phe
>WENV182053942
OHEJ01006578
114075
Bacillota
TAG
Leu
>WENV182053654
OHEJ01000280
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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