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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182083355
OHGO01000271
144583
Bacillota
ACG
Arg
>WENV182083356
OHGO01000272
44854
Bacillota
TGA
Ser
>WENV182083357
OHGO01000272
4624
Bacillota
GCT
Ser
>WENV182083379
OHGO01000437
11034
Bacillota
GGA
Ser
>WENV182083380
OHGO01000443
144594
Bacillota
CAC
Val
>WENV182083385
OHGO01000460
144612
Bacillota
TCT
Arg
>WENV182083397
OHGO01000557
411549
Bacillota
TTG
Gln
>WENV182083398
OHGO01000558
338149
Bacillota
CTC
Glu
>WENV182083404
OHGO01000635
58712
Bacillota
CAG
Leu
>WENV182083409
OHGO01000734
235171
Bacillota
CCA
Trp
>WENV182083410
OHGO01000734
196621
Bacillota
GTC
Asp
>WENV182083411
OHGO01000734
235095
Bacillota
GGT
Thr
>WENV182083412
OHGO01000734
235095
Bacillota
GGT
Thr
>WENV182083418
OHGO01000839
144621
Bacillota
GTT
Asn
>WENV182083419
OHGO01000855
245296
Bacillota
CCC
Gly
>WENV182083421
OHGO01000929
235098
Bacillota
GAC
Val
>WENV182083423
OHGO01000933
338128
Bacillota
TTC
Glu
>WENV182083438
OHGO01001227
80612
Bacillota
GTA
Tyr
>WENV182083452
OHGO01001307
235079
Bacillota
GAA
Phe
>WENV182083456
OHGO01001373
148188
Bacillota
CCG
Arg
>WENV182083461
OHGO01001565
338129
Bacillota
TGT
Thr
>WENV182083466
OHGO01001763
235124
Bacillota
TGG
Pro
>WENV182083474
OHGO01002135
272488
Bacillota
GAA
Phe
>WENV182083495
OHGO01003460
147684
Bacillota
ACG
Arg
>WENV182083502
OHGO01003619
338131
Bacillota
GCC
Gly
>WENV182083524
OHGO01005995
37269
Bacillota
TGA
Ser
>WENV182083544
OHGO01008427
152497
Bacillota
GTC
Asp
>WENV182083545
OHGO01008427
340265
Bacillota
GCC
Gly
>WENV182083546
OHGO01008559
185292
Bacillota
ACG
Arg
>WENV182083552
OHGO01009697
340265
Bacillota
GCC
Gly
>WENV182083555
OHGO01009697
269634
Bacillota
TTC
Glu
>WENV182083561
OHGO01010017
267649
Bacillota
TAC
Val
>WENV182083565
OHGO01010136
246023
Bacillota
TGC
Ala
>WENV182083568
OHGO01010451
18852
Bacillota
GCT
Ser
>WENV182083572
OHGO01010858
152018
Bacillota
CCT
Arg
>WENV182083577
OHGO01011641
281472
Bacillota
GGT
Thr
>WENV182083578
OHGO01011641
152045
Bacillota
CAT
Met
>WENV182083589
OHGO01013038
287000
Bacillota
GTT
Asn
>WENV182083591
OHGO01013038
429443
Bacillota
GCA
Cys
>WENV182083598
OHGO01014242
341763
Bacillota
CTC
Glu
>WENV182083599
OHGO01014439
10943
Bacillota
GGA
Ser
>WENV182083603
OHGO01014984
193585
Bacillota
CGG
Pro
>WENV182083617
OHGO01017806
411547
Bacillota
CTG
Gln
>WENV182083631
OHGO01019627
243401
Bacillota
CGT
Thr
>WENV182083644
OHGO01021671
412387
Bacillota
GCA
Cys
>WENV182083649
OHGO01024120
235137
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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