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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182102294
OHHU01041305
56079
Bacillota
AAG
Leu
>WENV182101885
OHHU01003858
175831
Bacillota
ACG
Arg
>WENV182101843
OHHU01002987
175842
Bacillota
CAC
Val
>WENV182101854
OHHU01003414
73664
Bacillota
CAG
Leu
>WENV182102217
OHHU01028733
73009
Bacillota
CAG
Leu
>WENV182101858
OHHU01003498
190476
Bacillota
CAT
Met
>WENV182102224
OHHU01029841
497729
Bacillota
CCA
Trp
>WENV182102222
OHHU01029102
291576
Bacillota
CCC
Gly
>WENV182101932
OHHU01005709
179755
Bacillota
CCG
Arg
>WENV182101988
OHHU01007514
398854
Bacillota
CTC
Glu
>WENV182101924
OHHU01005149
398852
Bacillota
CTC
Glu
>WENV182102120
OHHU01017817
480322
Bacillota
CTG
Gln
>WENV182101712
OHHU01001345
322848
Bacillota
CTT
Lys
>WENV182102098
OHHU01015264
280428
Bacillota
GAA
Phe
>WENV182102267
OHHU01034565
291634
Bacillota
GAA
Phe
>WENV182102141
OHHU01021084
280447
Bacillota
GAC
Val
>WENV182101888
OHHU01003905
189473
Bacillota
GAT
Ile
>WENV182102096
OHHU01015228
201856
Bacillota
GAT
Ile
>WENV182102343
OHHU01051559
405363
Bacillota
GCA
Cys
>WENV182101986
OHHU01007487
405393
Bacillota
GCC
Gly
>WENV182102030
OHHU01010533
5692
Bacillota
GCT
Ser
>WENV182101960
OHHU01006871
280444
Bacillota
GGT
Thr
>WENV182101961
OHHU01006877
117745
Bacillota
GTA
Tyr
>WENV182102168
OHHU01024111
186123
Bacillota
GTC
Asp
>WENV182101959
OHHU01006871
175849
Bacillota
GTC
Asp
>WENV182101390
OHHU01000058
348419
Bacillota
GTT
Asn
>WENV182101391
OHHU01000058
348419
Bacillota
GTT
Asn
>WENV182101867
OHHU01003636
175868
Bacillota
GTT
Asn
>WENV182101989
OHHU01007514
175868
Bacillota
GTT
Asn
>WENV182101600
OHHU01000692
290391
Bacillota
TAC
Val
>WENV182101339
OHHU01000013
317482
Bacillota
TAC
Val
>WENV182102108
OHHU01016303
342104
Bacillota
TAC
Val
>WENV182102043
OHHU01011135
175859
Bacillota
TCT
Arg
>WENV182102029
OHHU01010533
56074
Bacillota
TGA
Ser
>WENV182102327
OHHU01048466
280486
Bacillota
TGC
Ala
>WENV182102036
OHHU01010859
398833
Bacillota
TGT
Thr
>WENV182101690
OHHU01001161
407840
Bacillota
TTC
Glu
>WENV182101859
OHHU01003498
398832
Bacillota
TTC
Glu
>WENV182101710
OHHU01001328
406553
Bacillota
TTG
Gln
>WENV182101936
OHHU01005879
480324
Bacillota
TTG
Gln
>WENV182102066
OHHU01012473
346451
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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