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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182153873
OHLO01000182
290325
Bacillota
GCC
Gly
>WENV182153888
OHLO01000197
280476
Bacillota
TTT
Lys
>WENV182153935
OHLO01000498
343590
Bacillota
GCC
Gly
>WENV182153947
OHLO01000662
27216
Bacillota
GCT
Ser
>WENV182154015
OHLO01001794
360353
Bacillota
CTT
Lys
>WENV182154050
OHLO01002719
497729
Bacillota
CCA
Trp
>WENV182154063
OHLO01003031
179176
Bacillota
ACG
Arg
>WENV182154069
OHLO01003390
295166
Bacillota
TGC
Ala
>WENV182154070
OHLO01003390
236579
Bacillota
GAT
Ile
>WENV182154072
OHLO01003447
405393
Bacillota
GCC
Gly
>WENV182154091
OHLO01004436
280473
Bacillota
TGG
Pro
>WENV182154106
OHLO01005217
280500
Bacillota
TGC
Ala
>WENV182154123
OHLO01006117
189473
Bacillota
GAT
Ile
>WENV182154162
OHLO01011115
346451
Bacillota
TTT
Lys
>WENV182154202
OHLO01016343
187364
Bacillota
CAT
Met
>WENV182154206
OHLO01018022
175868
Bacillota
GTT
Asn
>WENV182154211
OHLO01018369
82124
Bacillota
TAA
Leu
>WENV182154221
OHLO01019074
73009
Bacillota
CAG
Leu
>WENV182154242
OHLO01023888
353153
Bacillota
TGC
Ala
>WENV182154258
OHLO01026492
398852
Bacillota
CTC
Glu
>WENV182154261
OHLO01028500
56079
Bacillota
AAG
Leu
>WENV182154263
OHLO01028625
483485
Bacillota
CCC
Gly
>WENV182154266
OHLO01029839
190476
Bacillota
CAT
Met
>WENV182154287
OHLO01034384
179755
Bacillota
CCG
Arg
>WENV182154299
OHLO01036993
289123
Bacillota
GGT
Thr
>WENV182154314
OHLO01041007
480322
Bacillota
CTG
Gln
>WENV182154319
OHLO01042510
186123
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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