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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182158483
OHLZ01000171
44859
Bacillota
AAG
Leu
>WENV182158775
OHLZ01011575
147684
Bacillota
ACG
Arg
>WENV182158856
OHLZ01029174
144583
Bacillota
ACG
Arg
>WENV182158592
OHLZ01000703
144594
Bacillota
CAC
Val
>WENV182158584
OHLZ01000632
59312
Bacillota
CAG
Leu
>WENV182158578
OHLZ01000617
58712
Bacillota
CAG
Leu
>WENV182158769
OHLZ01010636
155089
Bacillota
CAT
Met
>WENV182158841
OHLZ01024334
162445
Bacillota
CAT
Met
>WENV182158536
OHLZ01000352
235171
Bacillota
CCA
Trp
>WENV182158768
OHLZ01010564
245296
Bacillota
CCC
Gly
>WENV182158579
OHLZ01000617
148188
Bacillota
CCG
Arg
>WENV182158467
OHLZ01000141
338147
Bacillota
CTC
Glu
>WENV182158476
OHLZ01000161
338147
Bacillota
CTC
Glu
>WENV182158518
OHLZ01000301
338147
Bacillota
CTC
Glu
>WENV182158552
OHLZ01000461
338147
Bacillota
CTC
Glu
>WENV182158674
OHLZ01002968
338143
Bacillota
CTC
Glu
>WENV182158655
OHLZ01002385
338149
Bacillota
CTC
Glu
>WENV182158581
OHLZ01000621
338149
Bacillota
CTC
Glu
>WENV182158621
OHLZ01001160
411547
Bacillota
CTG
Gln
>WENV182158566
OHLZ01000543
344183
Bacillota
CTG
Gln
>WENV182158488
OHLZ01000196
235142
Bacillota
CTT
Lys
>WENV182158404
OHLZ01000035
235142
Bacillota
CTT
Lys
>WENV182158656
OHLZ01002385
272992
Bacillota
CTT
Lys
>WENV182158643
OHLZ01001641
235079
Bacillota
GAA
Phe
>WENV182158511
OHLZ01000270
235113
Bacillota
GAA
Phe
>WENV182158831
OHLZ01022182
272488
Bacillota
GAA
Phe
>WENV182158683
OHLZ01003378
272488
Bacillota
GAA
Phe
>WENV182158593
OHLZ01000721
235098
Bacillota
GAC
Val
>WENV182158635
OHLZ01001418
412387
Bacillota
GCA
Cys
>WENV182158785
OHLZ01013302
238945
Bacillota
GCC
Gly
>WENV182158529
OHLZ01000333
249259
Bacillota
GCC
Gly
>WENV182158670
OHLZ01002899
16266
Bacillota
GCT
Ser
>WENV182158574
OHLZ01000577
4624
Bacillota
GCT
Ser
>WENV182158577
OHLZ01000613
18852
Bacillota
GCT
Ser
>WENV182158648
OHLZ01001891
11034
Bacillota
GGA
Ser
>WENV182158743
OHLZ01006504
10680
Bacillota
GGA
Ser
>WENV182158647
OHLZ01001801
235095
Bacillota
GGT
Thr
>WENV182158538
OHLZ01000352
235095
Bacillota
GGT
Thr
>WENV182158750
OHLZ01007522
80612
Bacillota
GTA
Tyr
>WENV182158509
OHLZ01000270
95563
Bacillota
GTA
Tyr
>WENV182158460
OHLZ01000128
95563
Bacillota
GTA
Tyr
>WENV182158779
OHLZ01012652
340131
Bacillota
GTT
Asn
>WENV182158582
OHLZ01000621
144621
Bacillota
GTT
Asn
>WENV182158573
OHLZ01000577
44854
Bacillota
TGA
Ser
>WENV182158609
OHLZ01000967
37071
Bacillota
TGA
Ser
>WENV182158742
OHLZ01006504
37269
Bacillota
TGA
Ser
>WENV182158787
OHLZ01013303
246023
Bacillota
TGC
Ala
>WENV182158817
OHLZ01017321
241471
Bacillota
TGC
Ala
>WENV182158680
OHLZ01003153
235124
Bacillota
TGG
Pro
>WENV182158771
OHLZ01011131
338129
Bacillota
TGT
Thr
>WENV182158759
OHLZ01008764
338129
Bacillota
TGT
Thr
>WENV182158763
OHLZ01009524
338128
Bacillota
TTC
Glu
>WENV182158799
OHLZ01016305
411549
Bacillota
TTG
Gln
>WENV182158512
OHLZ01000270
235114
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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