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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182195957
OHPF01000001
154063
Bacillota
CGG
Pro
>WENV182195990
OHPF01000055
274189
Bacillota
TGT
Thr
>WENV182196004
OHPF01000072
37071
Bacillota
TGA
Ser
>WENV182196033
OHPF01000113
245296
Bacillota
CCC
Gly
>WENV182196040
OHPF01000127
235095
Bacillota
GGT
Thr
>WENV182196041
OHPF01000127
235171
Bacillota
CCA
Trp
>WENV182196042
OHPF01000127
196621
Bacillota
GTC
Asp
>WENV182196043
OHPF01000127
235095
Bacillota
GGT
Thr
>WENV182196057
OHPF01000148
236037
Bacillota
GTG
His
>WENV182196080
OHPF01000217
144612
Bacillota
TCT
Arg
>WENV182196082
OHPF01000217
58712
Bacillota
CAG
Leu
>WENV182196089
OHPF01000237
338149
Bacillota
CTC
Glu
>WENV182196090
OHPF01000237
144621
Bacillota
GTT
Asn
>WENV182196094
OHPF01000259
144594
Bacillota
CAC
Val
>WENV182196102
OHPF01000309
411547
Bacillota
CTG
Gln
>WENV182196103
OHPF01000309
245298
Bacillota
CGG
Pro
>WENV182196119
OHPF01000361
235098
Bacillota
GAC
Val
>WENV182196153
OHPF01000476
95563
Bacillota
GTA
Tyr
>WENV182196158
OHPF01000516
338147
Bacillota
CTC
Glu
>WENV182196160
OHPF01000551
44854
Bacillota
TGA
Ser
>WENV182196161
OHPF01000551
4624
Bacillota
GCT
Ser
>WENV182196163
OHPF01000569
44859
Bacillota
AAG
Leu
>WENV182196164
OHPF01000569
59312
Bacillota
CAG
Leu
>WENV182196176
OHPF01000671
235124
Bacillota
TGG
Pro
>WENV182196177
OHPF01000671
235124
Bacillota
TGG
Pro
>WENV182196179
OHPF01000705
148188
Bacillota
CCG
Arg
>WENV182196219
OHPF01001026
144610
Bacillota
GTG
His
>WENV182196221
OHPF01001026
235114
Bacillota
TTT
Lys
>WENV182196226
OHPF01001063
152149
Bacillota
GTG
His
>WENV182196237
OHPF01001282
144583
Bacillota
ACG
Arg
>WENV182196245
OHPF01001337
411549
Bacillota
TTG
Gln
>WENV182196270
OHPF01002023
235142
Bacillota
CTT
Lys
>WENV182196271
OHPF01002087
158247
Bacillota
>WENV182196274
OHPF01002177
58712
Bacillota
CAG
Leu
>WENV182196275
OHPF01002177
80612
Bacillota
GTA
Tyr
>WENV182196277
OHPF01002244
11034
Bacillota
GGA
Ser
>WENV182196278
OHPF01002315
338129
Bacillota
TGT
Thr
>WENV182196296
OHPF01002791
247734
Bacillota
TGC
Ala
>WENV182196298
OHPF01002796
338149
Bacillota
CTC
Glu
>WENV182196299
OHPF01002796
144621
Bacillota
GTT
Asn
>WENV182196308
OHPF01003000
235098
Bacillota
GAC
Val
>WENV182196327
OHPF01004114
235098
Bacillota
GAC
Val
>WENV182196368
OHPF01005364
144621
Bacillota
GTT
Asn
>WENV182196436
OHPF01009825
338128
Bacillota
TTC
Glu
>WENV182196441
OHPF01010261
307003
Bacillota
TGC
Ala
>WENV182196457
OHPF01011292
147684
Bacillota
ACG
Arg
>WENV182196540
OHPF01021909
163943
Bacillota
GTC
Asp
>WENV182196559
OHPF01023506
235150
Bacillota
TGC
Ala
>WENV182196578
OHPF01028950
153911
Bacillota
GAT
Ile
>WENV182196590
OHPF01031227
238974
Bacillota
GAA
Phe
>WENV182196591
OHPF01031501
429429
Bacillota
CCA
Trp
>WENV182196617
OHPF01037633
235078
Bacillota
TAC
Val
>WENV182196620
OHPF01037633
240017
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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