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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182226436
OHRF01000079
280462
Bacillota
GAA
Phe
>WENV182226448
OHRF01000094
280492
Bacillota
CTT
Lys
>WENV182226451
OHRF01000096
317482
Bacillota
TAC
Val
>WENV182226461
OHRF01000104
497729
Bacillota
CCA
Trp
>WENV182226475
OHRF01000120
56079
Bacillota
AAG
Leu
>WENV182226482
OHRF01000131
303718
Bacillota
TGT
Thr
>WENV182226493
OHRF01000145
398852
Bacillota
CTC
Glu
>WENV182226494
OHRF01000145
398852
Bacillota
CTC
Glu
>WENV182226507
OHRF01000171
302145
Bacillota
GAA
Phe
>WENV182226513
OHRF01000178
398852
Bacillota
CTC
Glu
>WENV182226521
OHRF01000205
117745
Bacillota
GTA
Tyr
>WENV182226531
OHRF01000235
294020
Bacillota
TAC
Val
>WENV182226538
OHRF01000248
280463
Bacillota
TTT
Lys
>WENV182226544
OHRF01000267
280473
Bacillota
TGG
Pro
>WENV182226550
OHRF01000294
280492
Bacillota
CTT
Lys
>WENV182226556
OHRF01000304
175857
Bacillota
GTG
His
>WENV182226573
OHRF01000378
398852
Bacillota
CTC
Glu
>WENV182226582
OHRF01000458
190476
Bacillota
CAT
Met
>WENV182226583
OHRF01000458
398832
Bacillota
TTC
Glu
>WENV182226590
OHRF01000504
356775
Bacillota
TGT
Thr
>WENV182226591
OHRF01000511
480324
Bacillota
TTG
Gln
>WENV182226601
OHRF01000597
398852
Bacillota
CTC
Glu
>WENV182226604
OHRF01000599
291576
Bacillota
CCC
Gly
>WENV182226608
OHRF01000615
284746
Bacillota
CTG
Gln
>WENV182226629
OHRF01000812
73664
Bacillota
CAG
Leu
>WENV182226632
OHRF01000887
398854
Bacillota
CTC
Glu
>WENV182226633
OHRF01000887
175868
Bacillota
GTT
Asn
>WENV182226635
OHRF01000926
480322
Bacillota
CTG
Gln
>WENV182226646
OHRF01001029
56074
Bacillota
TGA
Ser
>WENV182226647
OHRF01001029
5692
Bacillota
GCT
Ser
>WENV182226653
OHRF01001185
291576
Bacillota
CCC
Gly
>WENV182226664
OHRF01001304
280447
Bacillota
GAC
Val
>WENV182226665
OHRF01001307
179755
Bacillota
CCG
Arg
>WENV182226680
OHRF01001561
480322
Bacillota
CTG
Gln
>WENV182226683
OHRF01001634
480322
Bacillota
CTG
Gln
>WENV182226684
OHRF01001634
291581
Bacillota
CGG
Pro
>WENV182226693
OHRF01001783
284742
Bacillota
GAA
Phe
>WENV182226702
OHRF01001882
398833
Bacillota
TGT
Thr
>WENV182226706
OHRF01001959
175842
Bacillota
CAC
Val
>WENV182226710
OHRF01002059
284744
Bacillota
TTT
Lys
>WENV182226711
OHRF01002059
401111
Bacillota
TTC
Glu
>WENV182226713
OHRF01002104
280447
Bacillota
GAC
Val
>WENV182226714
OHRF01002144
175831
Bacillota
ACG
Arg
>WENV182226720
OHRF01002255
293309
Bacillota
GTT
Asn
>WENV182226735
OHRF01002532
398854
Bacillota
CTC
Glu
>WENV182226736
OHRF01002532
175868
Bacillota
GTT
Asn
>WENV182226754
OHRF01003388
27216
Bacillota
GCT
Ser
>WENV182226766
OHRF01003552
280447
Bacillota
GAC
Val
>WENV182226773
OHRF01003852
46835
Bacillota
TAA
Leu
>WENV182226812
OHRF01005019
280473
Bacillota
TGG
Pro
>WENV182226867
OHRF01007532
175859
Bacillota
TCT
Arg
>WENV182226869
OHRF01007532
73009
Bacillota
CAG
Leu
>WENV182226877
OHRF01008320
280447
Bacillota
GAC
Val
>WENV182226909
OHRF01010495
280444
Bacillota
GGT
Thr
>WENV182226996
OHRF01019185
280428
Bacillota
GAA
Phe
>WENV182227004
OHRF01020428
184497
Bacillota
GGG
Pro
>WENV182227052
OHRF01029184
99852
Bacillota
GTA
Tyr
>WENV182227054
OHRF01029536
175849
Bacillota
GTC
Asp
>WENV182227061
OHRF01029848
343590
Bacillota
GCC
Gly
>WENV182227100
OHRF01037398
280500
Bacillota
TGC
Ala
>WENV182227120
OHRF01040990
405363
Bacillota
GCA
Cys
>WENV182227137
OHRF01044880
186051
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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