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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182229877
OHRJ01015911
196621
Bacillota
GTC
Asp
>WENV182230019
OHRJ01038005
144612
Bacillota
TCT
Arg
>WENV182229791
OHRJ01006419
235098
Bacillota
GAC
Val
>WENV182229641
OHRJ01000132
148239
Bacillota
TCT
Arg
>WENV182229947
OHRJ01025322
44854
Bacillota
TGA
Ser
>WENV182229916
OHRJ01020255
144577
Bacillota
GAT
Ile
>WENV182230006
OHRJ01035380
304022
Bacillota
GCC
Gly
>WENV182229949
OHRJ01025408
307003
Bacillota
TGC
Ala
>WENV182229819
OHRJ01009222
238910
Bacillota
CTT
Lys
>WENV182229829
OHRJ01010798
235150
Bacillota
TGC
Ala
>WENV182229974
OHRJ01030123
41154
Bacillota
TAA
Leu
>WENV182229965
OHRJ01028353
11034
Bacillota
GGA
Ser
>WENV182230005
OHRJ01035380
235079
Bacillota
GAA
Phe
>WENV182229915
OHRJ01020255
235087
Bacillota
TGC
Ala
>WENV182229747
OHRJ01003554
338149
Bacillota
CTC
Glu
>WENV182229924
OHRJ01022062
245298
Bacillota
CGG
Pro
>WENV182229673
OHRJ01000368
37269
Bacillota
TGA
Ser
>WENV182229591
OHRJ01000040
169968
Bacillota
CAT
Met
>WENV182229923
OHRJ01022062
411547
Bacillota
CTG
Gln
>WENV182230027
OHRJ01041536
4624
Bacillota
GCT
Ser
>WENV182229878
OHRJ01015911
235095
Bacillota
GGT
Thr
>WENV182229956
OHRJ01026598
411549
Bacillota
TTG
Gln
>WENV182229992
OHRJ01032743
148188
Bacillota
CCG
Arg
>WENV182229941
OHRJ01024567
235124
Bacillota
TGG
Pro
>WENV182229937
OHRJ01024533
338129
Bacillota
TGT
Thr
>WENV182230029
OHRJ01041748
144583
Bacillota
ACG
Arg
>WENV182229875
OHRJ01015855
247734
Bacillota
TGC
Ala
>WENV182229789
OHRJ01006203
235171
Bacillota
CCA
Trp
>WENV182229696
OHRJ01000851
58712
Bacillota
CAG
Leu
>WENV182230037
OHRJ01045399
245296
Bacillota
CCC
Gly
>WENV182229748
OHRJ01003554
272992
Bacillota
CTT
Lys
>WENV182229712
OHRJ01001544
144594
Bacillota
CAC
Val
>WENV182229721
OHRJ01001888
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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