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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182232852
OHRP01000320
144612
Bacillota
TCT
Arg
>WENV182232940
OHRP01001277
235098
Bacillota
GAC
Val
>WENV182232880
OHRP01000491
44854
Bacillota
TGA
Ser
>WENV182233194
OHRP01027502
235154
Bacillota
GTT
Asn
>WENV182233115
OHRP01010319
144577
Bacillota
GAT
Ile
>WENV182233140
OHRP01015930
37071
Bacillota
TGA
Ser
>WENV182232889
OHRP01000573
59312
Bacillota
CAG
Leu
>WENV182233060
OHRP01005734
238910
Bacillota
CTT
Lys
>WENV182233214
OHRP01031441
338147
Bacillota
CTC
Glu
>WENV182233082
OHRP01007556
235150
Bacillota
TGC
Ala
>WENV182232865
OHRP01000385
182792
Bacillota
GTC
Asp
>WENV182232763
OHRP01000063
182792
Bacillota
GTC
Asp
>WENV182233086
OHRP01008241
44859
Bacillota
AAG
Leu
>WENV182233049
OHRP01005035
11034
Bacillota
GGA
Ser
>WENV182232901
OHRP01000760
11034
Bacillota
GGA
Ser
>WENV182232800
OHRP01000162
235079
Bacillota
GAA
Phe
>WENV182232761
OHRP01000063
235079
Bacillota
GAA
Phe
>WENV182233114
OHRP01010319
235087
Bacillota
TGC
Ala
>WENV182232793
OHRP01000152
245298
Bacillota
CGG
Pro
>WENV182232975
OHRP01002074
169968
Bacillota
CAT
Met
>WENV182233196
OHRP01027502
144599
Bacillota
GTC
Asp
>WENV182232980
OHRP01002111
144610
Bacillota
GTG
His
>WENV182233089
OHRP01008396
411547
Bacillota
CTG
Gln
>WENV182232792
OHRP01000152
411547
Bacillota
CTG
Gln
>WENV182232881
OHRP01000491
4624
Bacillota
GCT
Ser
>WENV182232866
OHRP01000385
235095
Bacillota
GGT
Thr
>WENV182232787
OHRP01000117
235095
Bacillota
GGT
Thr
>WENV182233231
OHRP01037139
344183
Bacillota
CTG
Gln
>WENV182232834
OHRP01000253
411549
Bacillota
TTG
Gln
>WENV182233079
OHRP01007296
235142
Bacillota
CTT
Lys
>WENV182232968
OHRP01001964
148188
Bacillota
CCG
Arg
>WENV182232873
OHRP01000426
148188
Bacillota
CCG
Arg
>WENV182233085
OHRP01008070
80612
Bacillota
GTA
Tyr
>WENV182232786
OHRP01000116
235124
Bacillota
TGG
Pro
>WENV182233006
OHRP01002592
338129
Bacillota
TGT
Thr
>WENV182232914
OHRP01000966
144583
Bacillota
ACG
Arg
>WENV182232804
OHRP01000169
144621
Bacillota
GTT
Asn
>WENV182233037
OHRP01004128
58712
Bacillota
CAG
Leu
>WENV182232893
OHRP01000686
245296
Bacillota
CCC
Gly
>WENV182232753
OHRP01000050
245296
Bacillota
CCC
Gly
>WENV182232955
OHRP01001734
144594
Bacillota
CAC
Val
>WENV182233145
OHRP01016168
95563
Bacillota
GTA
Tyr
>WENV182233027
OHRP01003343
272488
Bacillota
GAA
Phe
>WENV182232976
OHRP01002074
272488
Bacillota
GAA
Phe
>WENV182233183
OHRP01022362
238945
Bacillota
GCC
Gly
>WENV182232801
OHRP01000162
249259
Bacillota
GCC
Gly
>WENV182232764
OHRP01000063
249259
Bacillota
GCC
Gly
>WENV182232762
OHRP01000063
249259
Bacillota
GCC
Gly
>WENV182233008
OHRP01002758
273862
Bacillota
TGC
Ala
>WENV182232920
OHRP01001028
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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