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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182239681
OHSB01011182
196621
Bacillota
GTC
Asp
>WENV182239724
OHSB01014586
235098
Bacillota
GAC
Val
>WENV182239611
OHSB01006237
148239
Bacillota
TCT
Arg
>WENV182239702
OHSB01012688
44854
Bacillota
TGA
Ser
>WENV182239720
OHSB01014019
144577
Bacillota
GAT
Ile
>WENV182239683
OHSB01011182
304022
Bacillota
GCC
Gly
>WENV182239408
OHSB01000421
307003
Bacillota
TGC
Ala
>WENV182239813
OHSB01032164
238910
Bacillota
CTT
Lys
>WENV182239815
OHSB01032759
338147
Bacillota
CTC
Glu
>WENV182239718
OHSB01013971
235150
Bacillota
TGC
Ala
>WENV182239695
OHSB01011720
11034
Bacillota
GGA
Ser
>WENV182239682
OHSB01011182
235079
Bacillota
GAA
Phe
>WENV182239719
OHSB01014019
235087
Bacillota
TGC
Ala
>WENV182239455
OHSB01001115
338149
Bacillota
CTC
Glu
>WENV182239694
OHSB01011611
245298
Bacillota
CGG
Pro
>WENV182239618
OHSB01006359
100326
Bacillota
GTA
Tyr
>WENV182239612
OHSB01006237
144610
Bacillota
GTG
His
>WENV182239693
OHSB01011611
411547
Bacillota
CTG
Gln
>WENV182239703
OHSB01012688
4624
Bacillota
GCT
Ser
>WENV182239801
OHSB01028503
235095
Bacillota
GGT
Thr
>WENV182239549
OHSB01003550
235095
Bacillota
GGT
Thr
>WENV182239649
OHSB01009332
411549
Bacillota
TTG
Gln
>WENV182239631
OHSB01007366
148188
Bacillota
CCG
Arg
>WENV182239597
OHSB01004994
80612
Bacillota
GTA
Tyr
>WENV182239427
OHSB01000668
163943
Bacillota
GTC
Asp
>WENV182239762
OHSB01019273
338129
Bacillota
TGT
Thr
>WENV182239799
OHSB01028247
147183
Bacillota
GTT
Asn
>WENV182239480
OHSB01001730
144583
Bacillota
ACG
Arg
>WENV182239452
OHSB01001050
144621
Bacillota
GTT
Asn
>WENV182239577
OHSB01004251
243098
Bacillota
GGT
Thr
>WENV182239743
OHSB01016577
58712
Bacillota
CAG
Leu
>WENV182239770
OHSB01020555
245296
Bacillota
CCC
Gly
>WENV182239456
OHSB01001115
272992
Bacillota
CTT
Lys
>WENV182239406
OHSB01000414
344240
Bacillota
GCC
Gly
>WENV182239431
OHSB01000691
196632
Bacillota
GTC
Asp
>WENV182239784
OHSB01022318
95563
Bacillota
GTA
Tyr
>WENV182239705
OHSB01012716
338128
Bacillota
TTC
Glu
>WENV182239402
OHSB01000390
338128
Bacillota
TTC
Glu
>WENV182239432
OHSB01000691
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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