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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182271538
OHUG01000006
263765
Bacillota
TAC
Val
>WENV182271540
OHUG01000006
235134
Bacillota
GAA
Phe
>WENV182271541
OHUG01000006
240017
Bacillota
GCC
Gly
>WENV182271570
OHUG01000014
263765
Bacillota
TAC
Val
>WENV182271572
OHUG01000014
235134
Bacillota
GAA
Phe
>WENV182271573
OHUG01000014
240017
Bacillota
GCC
Gly
>WENV182271576
OHUG01000017
338147
Bacillota
CTC
Glu
>WENV182271617
OHUG01000045
235142
Bacillota
CTT
Lys
>WENV182271640
OHUG01000063
158247
Bacillota
>WENV182271666
OHUG01000099
37269
Bacillota
TGA
Ser
>WENV182271695
OHUG01000176
338147
Bacillota
CTC
Glu
>WENV182271701
OHUG01000183
144610
Bacillota
GTG
His
>WENV182271703
OHUG01000183
235114
Bacillota
TTT
Lys
>WENV182271727
OHUG01000223
235117
Bacillota
TAC
Val
>WENV182271729
OHUG01000223
235095
Bacillota
GGT
Thr
>WENV182271734
OHUG01000229
152149
Bacillota
GTG
His
>WENV182271737
OHUG01000238
95563
Bacillota
GTA
Tyr
>WENV182271738
OHUG01000239
235113
Bacillota
GAA
Phe
>WENV182271768
OHUG01000325
41154
Bacillota
TAA
Leu
>WENV182271769
OHUG01000326
147684
Bacillota
ACG
Arg
>WENV182271795
OHUG01000437
152492
Bacillota
GGG
Pro
>WENV182271806
OHUG01000501
412387
Bacillota
GCA
Cys
>WENV182271824
OHUG01000590
238910
Bacillota
CTT
Lys
>WENV182271828
OHUG01000611
338128
Bacillota
TTC
Glu
>WENV182271845
OHUG01000653
147684
Bacillota
ACG
Arg
>WENV182271864
OHUG01000811
144612
Bacillota
TCT
Arg
>WENV182271886
OHUG01000950
37071
Bacillota
TGA
Ser
>WENV182271916
OHUG01001154
235142
Bacillota
CTT
Lys
>WENV182271920
OHUG01001188
340802
Bacillota
TTG
Gln
>WENV182271943
OHUG01001417
235098
Bacillota
GAC
Val
>WENV182271963
OHUG01001720
338128
Bacillota
TTC
Glu
>WENV182271974
OHUG01001816
148188
Bacillota
CCG
Arg
>WENV182271991
OHUG01001993
429429
Bacillota
CCA
Trp
>WENV182272006
OHUG01002359
162445
Bacillota
CAT
Met
>WENV182272018
OHUG01002500
273862
Bacillota
TGC
Ala
>WENV182272055
OHUG01003065
247734
Bacillota
TGC
Ala
>WENV182272107
OHUG01005006
235079
Bacillota
GAA
Phe
>WENV182272139
OHUG01006096
379268
Bacillota
TTC
Glu
>WENV182272149
OHUG01006321
235294
Bacillota
TGC
Ala
>WENV182272161
OHUG01007254
144583
Bacillota
ACG
Arg
>WENV182272169
OHUG01008231
338152
Bacillota
TTC
Glu
>WENV182272170
OHUG01008231
241432
Bacillota
TGT
Thr
>WENV182272175
OHUG01008393
272488
Bacillota
GAA
Phe
>WENV182272189
OHUG01009852
411547
Bacillota
CTG
Gln
>WENV182272190
OHUG01009852
245298
Bacillota
CGG
Pro
>WENV182272206
OHUG01011366
44854
Bacillota
TGA
Ser
>WENV182272207
OHUG01011366
4624
Bacillota
GCT
Ser
>WENV182272231
OHUG01013308
144763
Bacillota
TGG
Pro
>WENV182272257
OHUG01017240
380750
Bacillota
TGT
Thr
>WENV182272259
OHUG01017240
116350
Bacillota
TAG
Leu
>WENV182272260
OHUG01017240
338208
Bacillota
>WENV182272261
OHUG01017240
144762
Bacillota
TCT
Arg
>WENV182272262
OHUG01017240
235290
Bacillota
TTG
Gln
>WENV182272263
OHUG01017240
235287
Bacillota
TTT
Lys
>WENV182272270
OHUG01019200
235087
Bacillota
TGC
Ala
>WENV182272283
OHUG01023739
155273
Bacillota
CAT
Met
>WENV182272286
OHUG01023986
144594
Bacillota
CAC
Val
>WENV182272295
OHUG01026731
11034
Bacillota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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