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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182272319
OHUH01000012
44859
Bacillota
AAG
Leu
>WENV182272318
OHUH01000012
44859
Bacillota
AAG
Leu
>WENV182272532
OHUH01007544
147684
Bacillota
ACG
Arg
>WENV182272407
OHUH01000257
144583
Bacillota
ACG
Arg
>WENV182272425
OHUH01000436
144594
Bacillota
CAC
Val
>WENV182272320
OHUH01000012
59312
Bacillota
CAG
Leu
>WENV182272385
OHUH01000098
235171
Bacillota
CCA
Trp
>WENV182272396
OHUH01000161
245296
Bacillota
CCC
Gly
>WENV182272434
OHUH01000609
148188
Bacillota
CCG
Arg
>WENV182272370
OHUH01000077
245298
Bacillota
CGG
Pro
>WENV182272410
OHUH01000300
338147
Bacillota
CTC
Glu
>WENV182272389
OHUH01000118
338147
Bacillota
CTC
Glu
>WENV182272355
OHUH01000040
338147
Bacillota
CTC
Glu
>WENV182272349
OHUH01000021
338147
Bacillota
CTC
Glu
>WENV182272447
OHUH01001069
338149
Bacillota
CTC
Glu
>WENV182272369
OHUH01000077
411547
Bacillota
CTG
Gln
>WENV182272505
OHUH01004905
238910
Bacillota
CTT
Lys
>WENV182272358
OHUH01000050
235142
Bacillota
CTT
Lys
>WENV182272514
OHUH01005411
235134
Bacillota
GAA
Phe
>WENV182272376
OHUH01000084
235113
Bacillota
GAA
Phe
>WENV182272374
OHUH01000082
235098
Bacillota
GAC
Val
>WENV182272445
OHUH01000868
156189
Bacillota
GAT
Ile
>WENV182272515
OHUH01005411
240017
Bacillota
GCC
Gly
>WENV182272351
OHUH01000030
238945
Bacillota
GCC
Gly
>WENV182272384
OHUH01000097
4624
Bacillota
GCT
Ser
>WENV182272315
OHUH01000008
11034
Bacillota
GGA
Ser
>WENV182272387
OHUH01000098
235095
Bacillota
GGT
Thr
>WENV182272378
OHUH01000086
235095
Bacillota
GGT
Thr
>WENV182272544
OHUH01010301
80612
Bacillota
GTA
Tyr
>WENV182272365
OHUH01000059
95563
Bacillota
GTA
Tyr
>WENV182272448
OHUH01001069
144621
Bacillota
GTT
Asn
>WENV182272352
OHUH01000034
144621
Bacillota
GTT
Asn
>WENV182272475
OHUH01002799
237265
Bacillota
TAC
Val
>WENV182272473
OHUH01002590
144612
Bacillota
TCT
Arg
>WENV182272343
OHUH01000019
157635
Bacillota
TCT
Arg
>WENV182272383
OHUH01000097
44854
Bacillota
TGA
Ser
>WENV182272361
OHUH01000055
37071
Bacillota
TGA
Ser
>WENV182272311
OHUH01000003
37269
Bacillota
TGA
Ser
>WENV182272499
OHUH01004813
235294
Bacillota
TGC
Ala
>WENV182272454
OHUH01001331
241471
Bacillota
TGC
Ala
>WENV182272486
OHUH01003505
247734
Bacillota
TGC
Ala
>WENV182272411
OHUH01000301
235124
Bacillota
TGG
Pro
>WENV182272421
OHUH01000381
338129
Bacillota
TGT
Thr
>WENV182272400
OHUH01000193
338128
Bacillota
TTC
Glu
>WENV182272373
OHUH01000081
411549
Bacillota
TTG
Gln
>WENV182272377
OHUH01000084
235114
Bacillota
TTT
Lys
>WENV182272476
OHUH01002799
240190
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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