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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182287594
OHVS01010907
99852
Bacillota
GTA
Tyr
>WENV182287698
OHVS01025421
343590
Bacillota
GCC
Gly
>WENV182287730
OHVS01033543
405363
Bacillota
GCA
Cys
>WENV182286979
OHVS01000002
280428
Bacillota
GAA
Phe
>WENV182287490
OHVS01004446
175842
Bacillota
CAC
Val
>WENV182287585
OHVS01010246
348419
Bacillota
GTT
Asn
>WENV182287624
OHVS01014285
184497
Bacillota
GGG
Pro
>WENV182287345
OHVS01001261
179176
Bacillota
ACG
Arg
>WENV182287287
OHVS01000767
190476
Bacillota
CAT
Met
>WENV182287569
OHVS01008423
5692
Bacillota
GCT
Ser
>WENV182286977
OHVS01000002
280427
Bacillota
TAC
Val
>WENV182287485
OHVS01004092
284723
Bacillota
TAC
Val
>WENV182287333
OHVS01001186
73009
Bacillota
CAG
Leu
>WENV182287529
OHVS01006307
481217
Bacillota
GCA
Cys
>WENV182287448
OHVS01002811
291581
Bacillota
CGG
Pro
>WENV182287249
OHVS01000502
175859
Bacillota
TCT
Arg
>WENV182287616
OHVS01013350
175831
Bacillota
ACG
Arg
>WENV182287677
OHVS01021390
353153
Bacillota
TGC
Ala
>WENV182287447
OHVS01002811
480322
Bacillota
CTG
Gln
>WENV182287435
OHVS01002559
401685
Bacillota
TTG
Gln
>WENV182287439
OHVS01002600
175868
Bacillota
GTT
Asn
>WENV182287438
OHVS01002600
398854
Bacillota
CTC
Glu
>WENV182287668
OHVS01020057
291576
Bacillota
CCC
Gly
>WENV182287468
OHVS01003257
480324
Bacillota
TTG
Gln
>WENV182287112
OHVS01000129
497729
Bacillota
CCA
Trp
>WENV182287240
OHVS01000453
303718
Bacillota
TGT
Thr
>WENV182287720
OHVS01030815
73638
Bacillota
AAG
Leu
>WENV182287635
OHVS01015571
292374
Bacillota
TGC
Ala
>WENV182287528
OHVS01006261
280444
Bacillota
GGT
Thr
>WENV182287561
OHVS01008319
291597
Bacillota
TGC
Ala
>WENV182287686
OHVS01023457
223045
Bacillota
GAT
Ile
>WENV182287380
OHVS01001530
179755
Bacillota
CCG
Arg
>WENV182287517
OHVS01005564
179755
Bacillota
CCG
Arg
>WENV182287204
OHVS01000323
46835
Bacillota
TAA
Leu
>WENV182287288
OHVS01000767
398832
Bacillota
TTC
Glu
>WENV182287402
OHVS01001741
398832
Bacillota
TTC
Glu
>WENV182287598
OHVS01011021
280476
Bacillota
TTT
Lys
>WENV182287634
OHVS01015571
201856
Bacillota
GAT
Ile
>WENV182287159
OHVS01000223
280483
Bacillota
GAA
Phe
>WENV182287434
OHVS01002559
175857
Bacillota
GTG
His
>WENV182287160
OHVS01000223
285756
Bacillota
GCC
Gly
>WENV182287709
OHVS01028319
398833
Bacillota
TGT
Thr
>WENV182287527
OHVS01006261
175849
Bacillota
GTC
Asp
>WENV182287568
OHVS01008423
56074
Bacillota
TGA
Ser
>WENV182287715
OHVS01029934
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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