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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182346968
OIAV01000126
349107
Bacillota
GCC
Gly
>WENV182346967
OIAV01000126
280428
Bacillota
GAA
Phe
>WENV182347072
OIAV01004401
356660
Bacillota
CTT
Lys
>WENV182347010
OIAV01000715
56397
Bacillota
CAA
Leu
>WENV182346901
OIAV01000002
179917
Bacillota
CAT
Met
>WENV182346902
OIAV01000002
302145
Bacillota
GAA
Phe
>WENV182346914
OIAV01000016
280492
Bacillota
CTT
Lys
>WENV182346924
OIAV01000028
280492
Bacillota
CTT
Lys
>WENV182346984
OIAV01000278
175842
Bacillota
CAC
Val
>WENV182347094
OIAV01007217
179176
Bacillota
ACG
Arg
>WENV182347012
OIAV01000742
190476
Bacillota
CAT
Met
>WENV182346917
OIAV01000017
73664
Bacillota
CAG
Leu
>WENV182346961
OIAV01000114
280447
Bacillota
GAC
Val
>WENV182346958
OIAV01000108
5692
Bacillota
GCT
Ser
>WENV182346929
OIAV01000041
73009
Bacillota
CAG
Leu
>WENV182346936
OIAV01000053
291581
Bacillota
CGG
Pro
>WENV182346954
OIAV01000097
175859
Bacillota
TCT
Arg
>WENV182346989
OIAV01000309
175831
Bacillota
ACG
Arg
>WENV182347008
OIAV01000715
282730
Bacillota
TAC
Val
>WENV182347009
OIAV01000715
282731
Bacillota
GTG
His
>WENV182346935
OIAV01000053
480322
Bacillota
CTG
Gln
>WENV182346976
OIAV01000227
480322
Bacillota
CTG
Gln
>WENV182346930
OIAV01000043
175868
Bacillota
GTT
Asn
>WENV182346945
OIAV01000073
175868
Bacillota
GTT
Asn
>WENV182346944
OIAV01000073
398854
Bacillota
CTC
Glu
>WENV182346938
OIAV01000059
291576
Bacillota
CCC
Gly
>WENV182346946
OIAV01000075
480324
Bacillota
TTG
Gln
>WENV182346966
OIAV01000124
497729
Bacillota
CCA
Trp
>WENV182346915
OIAV01000017
56079
Bacillota
AAG
Leu
>WENV182346916
OIAV01000017
56079
Bacillota
AAG
Leu
>WENV182347032
OIAV01001232
404126
Bacillota
GCC
Gly
>WENV182346926
OIAV01000031
117745
Bacillota
GTA
Tyr
>WENV182346962
OIAV01000117
280444
Bacillota
GGT
Thr
>WENV182346980
OIAV01000245
280444
Bacillota
GGT
Thr
>WENV182346908
OIAV01000010
46643
Bacillota
TGA
Ser
>WENV182347004
OIAV01000605
179755
Bacillota
CCG
Arg
>WENV182347064
OIAV01003259
52553
Bacillota
TAA
Leu
>WENV182347013
OIAV01000742
398832
Bacillota
TTC
Glu
>WENV182347103
OIAV01008338
114009
Bacillota
GTA
Tyr
>WENV182346909
OIAV01000010
280462
Bacillota
GAA
Phe
>WENV182347055
OIAV01002758
280483
Bacillota
GAA
Phe
>WENV182347114
OIAV01009324
285601
Bacillota
TTC
Glu
>WENV182347056
OIAV01002758
285756
Bacillota
GCC
Gly
>WENV182346979
OIAV01000245
175849
Bacillota
GTC
Asp
>WENV182346910
OIAV01000010
280463
Bacillota
TTT
Lys
>WENV182346957
OIAV01000108
56074
Bacillota
TGA
Ser
>WENV182346975
OIAV01000201
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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