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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182357926
OIBU01000029
175859
Bacillota
TCT
Arg
>WENV182357928
OIBU01000029
73009
Bacillota
CAG
Leu
>WENV182357930
OIBU01000035
280428
Bacillota
GAA
Phe
>WENV182357943
OIBU01000059
179755
Bacillota
CCG
Arg
>WENV182357950
OIBU01000070
179755
Bacillota
CCG
Arg
>WENV182357955
OIBU01000075
56074
Bacillota
TGA
Ser
>WENV182357956
OIBU01000075
5692
Bacillota
GCT
Ser
>WENV182357958
OIBU01000090
117745
Bacillota
GTA
Tyr
>WENV182357959
OIBU01000094
175842
Bacillota
CAC
Val
>WENV182357960
OIBU01000099
56079
Bacillota
AAG
Leu
>WENV182357961
OIBU01000099
73664
Bacillota
CAG
Leu
>WENV182357962
OIBU01000102
291576
Bacillota
CCC
Gly
>WENV182357985
OIBU01000186
175831
Bacillota
ACG
Arg
>WENV182357986
OIBU01000189
398852
Bacillota
CTC
Glu
>WENV182357994
OIBU01000239
280444
Bacillota
GGT
Thr
>WENV182357996
OIBU01000239
175849
Bacillota
GTC
Asp
>WENV182357997
OIBU01000239
280444
Bacillota
GGT
Thr
>WENV182358017
OIBU01000403
179176
Bacillota
ACG
Arg
>WENV182358019
OIBU01000417
398854
Bacillota
CTC
Glu
>WENV182358020
OIBU01000417
175868
Bacillota
GTT
Asn
>WENV182358024
OIBU01000437
73009
Bacillota
CAG
Leu
>WENV182358025
OIBU01000437
99852
Bacillota
GTA
Tyr
>WENV182358030
OIBU01000498
190476
Bacillota
CAT
Met
>WENV182358031
OIBU01000498
398832
Bacillota
TTC
Glu
>WENV182358034
OIBU01000517
480324
Bacillota
TTG
Gln
>WENV182358035
OIBU01000523
280492
Bacillota
CTT
Lys
>WENV182358042
OIBU01000645
280473
Bacillota
TGG
Pro
>WENV182358046
OIBU01000676
179755
Bacillota
CCG
Arg
>WENV182358047
OIBU01000683
280492
Bacillota
CTT
Lys
>WENV182358063
OIBU01000773
117745
Bacillota
GTA
Tyr
>WENV182358065
OIBU01000773
280462
Bacillota
GAA
Phe
>WENV182358066
OIBU01000773
280463
Bacillota
TTT
Lys
>WENV182358080
OIBU01000939
175868
Bacillota
GTT
Asn
>WENV182358091
OIBU01001132
175857
Bacillota
GTG
His
>WENV182358093
OIBU01001132
280463
Bacillota
TTT
Lys
>WENV182358100
OIBU01001267
480322
Bacillota
CTG
Gln
>WENV182358101
OIBU01001267
291581
Bacillota
CGG
Pro
>WENV182358103
OIBU01001311
407858
Bacillota
GCC
Gly
>WENV182358105
OIBU01001328
58120
Bacillota
AAG
Leu
>WENV182358107
OIBU01001493
480322
Bacillota
CTG
Gln
>WENV182358124
OIBU01001817
184497
Bacillota
GGG
Pro
>WENV182358128
OIBU01001855
321248
Bacillota
TAC
Val
>WENV182358137
OIBU01002086
56079
Bacillota
AAG
Leu
>WENV182358148
OIBU01002229
398857
Bacillota
TTC
Glu
>WENV182358150
OIBU01002255
178666
Bacillota
GAT
Ile
>WENV182358162
OIBU01003188
481217
Bacillota
GCA
Cys
>WENV182358180
OIBU01004038
58120
Bacillota
AAG
Leu
>WENV182358183
OIBU01004100
405363
Bacillota
GCA
Cys
>WENV182358198
OIBU01004606
298260
Bacillota
GTT
Asn
>WENV182358207
OIBU01005946
179755
Bacillota
CCG
Arg
>WENV182358238
OIBU01007451
280483
Bacillota
GAA
Phe
>WENV182358315
OIBU01017017
283417
Bacillota
AGT
Thr
>WENV182358316
OIBU01017065
295166
Bacillota
TGC
Ala
>WENV182358317
OIBU01017065
179563
Bacillota
GAT
Ile
>WENV182358318
OIBU01017344
285556
Bacillota
TGT
Thr
>WENV182358326
OIBU01018941
118245
Bacillota
GTA
Tyr
>WENV182358327
OIBU01018941
480918
Bacillota
>WENV182358328
OIBU01018941
283422
Bacillota
GTG
His
>WENV182358329
OIBU01018941
480457
Bacillota
GCA
Cys
>WENV182358340
OIBU01020412
497729
Bacillota
CCA
Trp
>WENV182358343
OIBU01020835
46805
Bacillota
>WENV182358356
OIBU01023368
46835
Bacillota
TAA
Leu
>WENV182358359
OIBU01023885
283367
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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