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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182362897
OICE01004550
179176
Bacillota
ACG
Arg
>WENV182362712
OICE01000312
175831
Bacillota
ACG
Arg
>WENV182362759
OICE01000712
175842
Bacillota
CAC
Val
>WENV182362611
OICE01000042
73664
Bacillota
CAG
Leu
>WENV182362823
OICE01001607
73009
Bacillota
CAG
Leu
>WENV182362850
OICE01002304
179917
Bacillota
CAT
Met
>WENV182362987
OICE01013792
215243
Bacillota
CAT
Met
>WENV182362646
OICE01000099
190476
Bacillota
CAT
Met
>WENV182363019
OICE01018412
497729
Bacillota
CCA
Trp
>WENV182362790
OICE01001044
291576
Bacillota
CCC
Gly
>WENV182362829
OICE01001690
179755
Bacillota
CCG
Arg
>WENV182363073
OICE01031286
184522
Bacillota
CCT
Arg
>WENV182362860
OICE01002680
291581
Bacillota
CGG
Pro
>WENV182363061
OICE01028111
179243
Bacillota
CGG
Pro
>WENV182363076
OICE01033559
289476
Bacillota
CGT
Thr
>WENV182362659
OICE01000123
398854
Bacillota
CTC
Glu
>WENV182362906
OICE01005392
398852
Bacillota
CTC
Glu
>WENV182362859
OICE01002680
480322
Bacillota
CTG
Gln
>WENV182363072
OICE01030756
280492
Bacillota
CTT
Lys
>WENV182362888
OICE01003855
330413
Bacillota
CTT
Lys
>WENV182362741
OICE01000526
280428
Bacillota
GAA
Phe
>WENV182363044
OICE01024240
284627
Bacillota
GAA
Phe
>WENV182362740
OICE01000519
280447
Bacillota
GAC
Val
>WENV182362836
OICE01001797
234991
Bacillota
GAT
Ile
>WENV182363046
OICE01024490
179563
Bacillota
GAT
Ile
>WENV182362739
OICE01000514
189473
Bacillota
GAT
Ile
>WENV182362695
OICE01000236
204381
Bacillota
GAT
Ile
>WENV182362981
OICE01012555
481217
Bacillota
GCA
Cys
>WENV182362742
OICE01000526
349107
Bacillota
GCC
Gly
>WENV182362641
OICE01000081
285756
Bacillota
GCC
Gly
>WENV182362881
OICE01003773
405393
Bacillota
GCC
Gly
>WENV182362719
OICE01000338
5692
Bacillota
GCT
Ser
>WENV182362799
OICE01001217
184497
Bacillota
GGG
Pro
>WENV182362809
OICE01001369
280444
Bacillota
GGT
Thr
>WENV182362812
OICE01001369
280444
Bacillota
GGT
Thr
>WENV182362824
OICE01001607
99852
Bacillota
GTA
Tyr
>WENV182362716
OICE01000333
118669
Bacillota
GTA
Tyr
>WENV182362880
OICE01003773
186123
Bacillota
GTC
Asp
>WENV182362811
OICE01001369
175849
Bacillota
GTC
Asp
>WENV182362608
OICE01000041
175857
Bacillota
GTG
His
>WENV182362660
OICE01000123
175868
Bacillota
GTT
Asn
>WENV182363093
OICE01038088
82124
Bacillota
TAA
Leu
>WENV182362843
OICE01002137
46835
Bacillota
TAA
Leu
>WENV182362640
OICE01000081
290391
Bacillota
TAC
Val
>WENV182362842
OICE01002137
294020
Bacillota
TAC
Val
>WENV182362862
OICE01002798
175859
Bacillota
TCT
Arg
>WENV182362607
OICE01000041
179810
Bacillota
TCT
Arg
>WENV182363058
OICE01028080
47207
Bacillota
TGA
Ser
>WENV182362577
OICE01000015
52748
Bacillota
TGA
Ser
>WENV182362718
OICE01000338
56074
Bacillota
TGA
Ser
>WENV182362990
OICE01013856
280500
Bacillota
TGC
Ala
>WENV182362835
OICE01001797
295166
Bacillota
TGC
Ala
>WENV182362967
OICE01011348
355816
Bacillota
TGC
Ala
>WENV182363060
OICE01028111
187706
Bacillota
TGG
Pro
>WENV182362794
OICE01001155
280473
Bacillota
TGG
Pro
>WENV182362647
OICE01000099
398832
Bacillota
TTC
Glu
>WENV182362902
OICE01004887
285601
Bacillota
TTC
Glu
>WENV182362959
OICE01010076
401685
Bacillota
TTG
Gln
>WENV182362826
OICE01001633
480324
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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