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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182385350
OIDW01000067
56079
Bacillota
AAG
Leu
>WENV182385729
OIDW01013101
58120
Bacillota
AAG
Leu
>WENV182385554
OIDW01001335
179176
Bacillota
ACG
Arg
>WENV182385392
OIDW01000098
73664
Bacillota
CAG
Leu
>WENV182385467
OIDW01000282
73664
Bacillota
CAG
Leu
>WENV182385699
OIDW01008785
73009
Bacillota
CAG
Leu
>WENV182385575
OIDW01001744
187458
Bacillota
CAT
Met
>WENV182385507
OIDW01000476
497729
Bacillota
CCA
Trp
>WENV182385651
OIDW01004493
179755
Bacillota
CCG
Arg
>WENV182385765
OIDW01020123
291581
Bacillota
CGG
Pro
>WENV182385296
OIDW01000020
398852
Bacillota
CTC
Glu
>WENV182385313
OIDW01000035
398852
Bacillota
CTC
Glu
>WENV182385331
OIDW01000048
398852
Bacillota
CTC
Glu
>WENV182385443
OIDW01000195
398852
Bacillota
CTC
Glu
>WENV182385514
OIDW01000570
398852
Bacillota
CTC
Glu
>WENV182385515
OIDW01000570
398852
Bacillota
CTC
Glu
>WENV182385615
OIDW01002987
284746
Bacillota
CTG
Gln
>WENV182385764
OIDW01020123
480322
Bacillota
CTG
Gln
>WENV182385354
OIDW01000070
280492
Bacillota
CTT
Lys
>WENV182385391
OIDW01000097
280492
Bacillota
CTT
Lys
>WENV182385582
OIDW01001967
287380
Bacillota
CTT
Lys
>WENV182385734
OIDW01013813
322848
Bacillota
CTT
Lys
>WENV182385398
OIDW01000107
280428
Bacillota
GAA
Phe
>WENV182385665
OIDW01005914
284742
Bacillota
GAA
Phe
>WENV182385308
OIDW01000033
280462
Bacillota
GAA
Phe
>WENV182385724
OIDW01012504
405363
Bacillota
GCA
Cys
>WENV182385771
OIDW01023005
481217
Bacillota
GCA
Cys
>WENV182385287
OIDW01000014
285756
Bacillota
GCC
Gly
>WENV182385746
OIDW01015653
5692
Bacillota
GCT
Ser
>WENV182385671
OIDW01006097
184497
Bacillota
GGG
Pro
>WENV182385595
OIDW01002303
100696
Bacillota
GTA
Tyr
>WENV182385312
OIDW01000035
117745
Bacillota
GTA
Tyr
>WENV182385415
OIDW01000130
118669
Bacillota
GTA
Tyr
>WENV182385378
OIDW01000096
175899
Bacillota
GTC
Asp
>WENV182385385
OIDW01000096
175857
Bacillota
GTG
His
>WENV182385736
OIDW01014032
348419
Bacillota
GTT
Asn
>WENV182385645
OIDW01004132
175868
Bacillota
GTT
Asn
>WENV182385396
OIDW01000107
280427
Bacillota
TAC
Val
>WENV182385660
OIDW01005541
176014
Bacillota
TCT
Arg
>WENV182385311
OIDW01000033
46643
Bacillota
TGA
Ser
>WENV182385745
OIDW01015653
56074
Bacillota
TGA
Ser
>WENV182385750
OIDW01015976
398833
Bacillota
TGT
Thr
>WENV182385679
OIDW01006731
398857
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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