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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182408812
OIFG01000022
118683
Bacillota
GTA
Tyr
>WENV182409076
OIFG01001274
176033
Bacillota
CAT
Met
>WENV182409145
OIFG01003746
184537
Bacillota
ACG
Arg
>WENV182409047
OIFG01000800
408526
Bacillota
GCA
Cys
>WENV182408827
OIFG01000028
194497
Bacillota
CAT
Met
>WENV182409091
OIFG01001495
180107
Bacillota
TCT
Arg
>WENV182409002
OIFG01000271
296855
Bacillota
GGT
Thr
>WENV182408863
OIFG01000042
48505
Bacillota
TGA
Ser
>WENV182409071
OIFG01001274
398935
Bacillota
>WENV182409029
OIFG01000525
29930
Bacillota
GGA
Ser
>WENV182408879
OIFG01000051
289717
Bacillota
CTT
Lys
>WENV182408926
OIFG01000091
289717
Bacillota
CTT
Lys
>WENV182408866
OIFG01000044
400140
Bacillota
TTC
Glu
>WENV182409119
OIFG01001854
400140
Bacillota
TTC
Glu
>WENV182409014
OIFG01000436
20932
Bacillota
GCT
Ser
>WENV182409055
OIFG01000865
20932
Bacillota
GCT
Ser
>WENV182409045
OIFG01000800
291553
Bacillota
GAA
Phe
>WENV182409134
OIFG01002443
482593
Bacillota
CCC
Gly
>WENV182408817
OIFG01000027
400403
Bacillota
CCG
Arg
>WENV182409111
OIFG01001854
178942
Bacillota
ACG
Arg
>WENV182408763
OIFG01000002
180908
Bacillota
CGG
Pro
>WENV182408881
OIFG01000055
20942
Bacillota
GGA
Ser
>WENV182409078
OIFG01001274
184171
Bacillota
CAT
Met
>WENV182409107
OIFG01001854
118297
Bacillota
TAG
Leu
>WENV182409083
OIFG01001276
487804
Bacillota
GGT
Thr
>WENV182408778
OIFG01000005
182299
Bacillota
CAT
Met
>WENV182409003
OIFG01000271
184495
Bacillota
CAT
Met
>WENV182408792
OIFG01000009
141202
Bacillota
CAA
Leu
>WENV182408929
OIFG01000102
141202
Bacillota
CAA
Leu
>WENV182408969
OIFG01000153
293309
Bacillota
GTT
Asn
>WENV182409017
OIFG01000453
293309
Bacillota
GTT
Asn
>WENV182408999
OIFG01000271
289713
Bacillota
TGT
Thr
>WENV182409126
OIFG01001937
404091
Bacillota
TTG
Gln
>WENV182409125
OIFG01001937
289716
Bacillota
GTG
His
>WENV182409069
OIFG01001274
119278
Bacillota
TAG
Leu
>WENV182408918
OIFG01000083
480337
Bacillota
TCC
Gly
>WENV182408938
OIFG01000117
480337
Bacillota
TCC
Gly
>WENV182408984
OIFG01000210
304148
Bacillota
GTC
Asp
>WENV182409008
OIFG01000351
119459
Bacillota
TAG
Leu
>WENV182409028
OIFG01000478
119459
Bacillota
TAG
Leu
>WENV182408953
OIFG01000123
8610
Bacillota
GGA
Ser
>WENV182408882
OIFG01000055
280547
Bacillota
GTC
Asp
>WENV182409044
OIFG01000800
280547
Bacillota
GTC
Asp
>WENV182409018
OIFG01000453
289761
Bacillota
TTT
Lys
>WENV182408777
OIFG01000005
401835
Bacillota
GCA
Cys
>WENV182408971
OIFG01000153
289715
Bacillota
TAC
Val
>WENV182408981
OIFG01000188
289715
Bacillota
TAC
Val
>WENV182409020
OIFG01000453
289715
Bacillota
TAC
Val
>WENV182409024
OIFG01000453
289715
Bacillota
TAC
Val
>WENV182409133
OIFG01002303
289715
Bacillota
TAC
Val
>WENV182408916
OIFG01000083
20943
Bacillota
CGA
Ser
>WENV182408940
OIFG01000117
20943
Bacillota
CGA
Ser
>WENV182409118
OIFG01001854
8724
Bacillota
GCT
Ser
>WENV182408756
OIFG01000001
281330
Bacillota
CTG
Gln
>WENV182408919
OIFG01000083
184539
Bacillota
TCT
Arg
>WENV182408939
OIFG01000117
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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